Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03116 ATGGAGGAAACACCTAAACTCATCCATGGAACAATTGAGGCTACCATCTTCAATGCCTCACCTTATGCCCCTTTTTTCCCCTTCAATTGCATATGTACAAATGGAAACCCTACTTATGTGACCATCAAGATAGACAACAAGAAGGTTGCAAAAACAAGCAAAGAAAGAAATCGTGTTTGGAACCAAACCTTTCATATTCAATGTGCTCATCCAGCTGATTCACTCATTACCATTACATTAAAAACATCATATTCCAAATTAGGAAAATACCATATCAAGGCCCAACAACTTTTAAAGGAAGAAAATATAATTAATGGATCATTCCCTCTCCTCATGGAAAATGAAAAACCAAACCCAAAACTTAAATTGAAGTTTATATTATGGTTCAAGCATGCAAAATTGGAACAAAGTTTGGCAAATGTACTAAGCAATGAGGAATTTCAAGGGATGAGGGATGCAACATTTCCACTAAGATCCAATTGTCAAGTCAAACTTTATCATGATGCTCATCATTCTCATACTTTCCAGCCTCCCTTTGATCCATGTGGTACTCCCAAAAACCTTTGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAGTATATAGTTTATATTGCAGCTTGGTCCCTCAATCCTAACATGGTTTTGGTTAGAGATCCTCATACAGAAATCCAACATGCAAGAGGACTAAATTTAGGTGAGCTATTGAAAAAGAAGGCAAATGAAGGAGTGGTTGTGAGAGTTATGCTTTGGGATGATGAAACAACTTTACCATTGATCAAGAACAAAGGTGCAATGAACACACATGATGAGGATGCTTTTACTTATTTCAACCACACAAAAGTAATATGCAAAAAGTGTCCTAGATTACACCACAAGTTCCCAACAATCTTTGCTCATCATCAAAAGACAATAACAGTGGACACCAAAGTGCCTAAATCTTTTAGTGATAGAGAAATTATGAGCTTTGTTGGTGGTTTTGATTTGTGTGATGGTAGATATGATACAGAACAACATTCATTGTTTCAAACATTAATCAAGGAATCACATTGTTATGATTTTTACCAACCAAACATTGAAGGAGCTAACCTTAACAAAGGAGGACCAAGAGTTCCTTGGCATGATGCTCATGCTTGTGTTATTGGTGAGGCTGCTTGGGATGTTTTAACAAATTTTGAGCAAAGATGGACAAAACAATGTGACCCTTCTCTTTTATTCCCTACTAGTTCCCTAAAAAGTCTCATCCCTAAGACAAGTTCAATTACTTGTATAGCAAGTAATTGGAAAGTTCAAGTATATAGGTCAATTGATTATGTTTCAATTGGTGACTTGTGTGGAAATTTCAATGTTGAAAATAGTGTACATGAAGCTTATGTTGAAGCAATTAGGCATGCTGAGAGGTTTATATACATTGAAAACCAATACTTTATTGGAGGGTGTCAATTGTGGGAGAAAGATAAGAATTGTGGATGCACAAATTTAATTCCTATTGAAATTGCACTTAAGGTGGTAAGTAAGATTAAAGCAAAAGAGAGATTTGGAGTGTATATAGTTATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAATATGTTCAAGATATATTGCATTGGACTAGAGAAACTGTGGCTATGATGTATAGGTTGATTGGAGAAGCAATTAAAGATAGTGGTGAAGTAGGACATCCAAGAGATTACTTGAATTTCTTTTGTCTTGCAAATAGGGAGGTTAAGGGAAAAGGGGAGTATCTTCCATTGGATTCTCCTTATCCTGAGACACAATATTGGAATGCACAAAAAAATAGAAGATTCATGGTTTATGTTCATTCCAAGCTCATGATAGTGGATGACCTATACATATTAATAGGTTCAGCAAATATGAATCAAAGATCAATGGATGGAAAAAGGGACACTGAGATAGCCATAGGATGCTTCCAATATACTCAAGATGAAGTTGAGAAACAAATGAACATTGGTGATATTCATGCATATAGAATGTCACTATGGTATGAGCACACAAATAGTGTCAATGAATTGTTCCTAGAGCCAGAAAATTTGGAATGTGTGAAGAAGATGTGCTCAATAGGAGATCAAATGTGGGAAATATACAACAATGAAGAAATTATTGACATGGAAGGTGTGCACCTTGTTACTTACCCAATGAGGGTAACACAAGAAGGGTATGTGAAAGACTTGATTAATGTACCTCATTTCCCTGATACAAATTCTCTAGTCAAGGGGAAGAGATCTACATTTTTGCCACCTAACTTTACCACTTAG 2280 0.361 MEETPKLIHGTIEATIFNASPYAPFFPFNCICTNGNPTYVTIKIDNKKVAKTSKERNRVWNQTFHIQCAHPADSLITITLKTSYSKLGKYHIKAQQLLKEENIINGSFPLLMENEKPNPKLKLKFILWFKHAKLEQSLANVLSNEEFQGMRDATFPLRSNCQVKLYHDAHHSHTFQPPFDPCGTPKNLWEDVYKAIEGAKYIVYIAAWSLNPNMVLVRDPHTEIQHARGLNLGELLKKKANEGVVVRVMLWDDETTLPLIKNKGAMNTHDEDAFTYFNHTKVICKKCPRLHHKFPTIFAHHQKTITVDTKVPKSFSDREIMSFVGGFDLCDGRYDTEQHSLFQTLIKESHCYDFYQPNIEGANLNKGGPRVPWHDAHACVIGEAAWDVLTNFEQRWTKQCDPSLLFPTSSLKSLIPKTSSITCIASNWKVQVYRSIDYVSIGDLCGNFNVENSVHEAYVEAIRHAERFIYIENQYFIGGCQLWEKDKNCGCTNLIPIEIALKVVSKIKAKERFGVYIVIPMWPEGVPESEYVQDILHWTRETVAMMYRLIGEAIKDSGEVGHPRDYLNFFCLANREVKGKGEYLPLDSPYPETQYWNAQKNRRFMVYVHSKLMIVDDLYILIGSANMNQRSMDGKRDTEIAIGCFQYTQDEVEKQMNIGDIHAYRMSLWYEHTNSVNELFLEPENLECVKKMCSIGDQMWEIYNNEEIIDMEGVHLVTYPMRVTQEGYVKDLINVPHFPDTNSLVKGKRSTFLPPNFTT 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03116 759 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 333 IPR001736 GO:0003824
Car07g03116 759 SUPERFAMILY Phospholipase D/nuclease 146 406 - -
Car07g03116 759 PANTHER PHOSPHOLIPASE D ALPHA 4 759 - -
Car07g03116 759 SMART pld_4 604 631 IPR001736 GO:0003824
Car07g03116 759 SMART pld_4 296 333 IPR001736 GO:0003824
Car07g03116 759 Gene3D C2 domain 32 131 IPR035892 -
Car07g03116 759 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
Car07g03116 759 Gene3D Endonuclease Chain A 171 421 - -
Car07g03116 759 Gene3D Endonuclease Chain A 422 658 - -
Car07g03116 759 Pfam Phospholipase D C terminal 678 748 IPR024632 -
Car07g03116 759 PIRSF PLD_plant 7 759 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Car07g03116 759 Pfam Phospholipase D Active site motif 607 631 IPR001736 GO:0003824
Car07g03116 759 Pfam Phospholipase D Active site motif 297 333 IPR001736 GO:0003824
Car07g03116 759 Pfam C2 domain 38 110 IPR000008 -
Car07g03116 759 PANTHER PHOSPHOLIPASE D 4 759 IPR015679 -
Car07g03116 759 SUPERFAMILY Phospholipase D/nuclease 428 688 - -
Car07g03116 759 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 125 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03116 Car-Chr7 58337255 58341774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03116 30 759 Phospholipase D Gene Family (Wang group) AT1G55180 60.594 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03116 K01115 - gmx:100812642 1279.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03116 07 58337255 58341774 Car07g03116 07 58337255 58341774 ECH
Car01g02718 01 52610182 52613746 Car07g03116 07 58337255 58341774 PCT