Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03100 atgaacaacaacaacattacttgcatcacaagaaacaacagcaacaacaataacaCGACTCAAGCTTGTGCTGCATGTAAATACCAACGTAGAAAATGTGCACCTGATTGCATATTAGCACCTTATTTCCCTCATGATAAACAAAGACAATTCCTTAATGCTCATAAATTATTTGGTGTAAGTAACATTAACAAAATTATTAAATATCTTGATCCTCCTCTTAAGGATCAAGCGATGCGAACGATCATTTTTCAATCCGATATGCGTGCTAACGACCCGGTTGGTGGTTGTTACAAATACATTCAAGATCTACAAGCTCAGATTGAATATTGTAAAGCAGAACTTGATCTTGTTCATCAACAACTTGCTCTTTTTAGAGCTCAAGCTCAACAACAACAACAAGTTTATGGCGGTGATCAAGTTATTATGAATGGTGATTCATTGTTAGGTTTCTATAATCAAGGATCTATTGTTTCTGCTAATAATCCTCATTATCAATACAACATTCAACAAATGGTGCCTCAACAGGAACAGGAACAATATCTTATGATGCATGAGAGTAATAGTAGTATTCATAATTCTCCTTTGCAACAACATATTAATAGTTGGGCTATGCAAAGCTCTATTTCCCTCTCTTCTTTGTCATTGCATGGCCAGAGTAGTAATGCTAGTGATGAATATGATCATAAGCAAATTCTTGATATACCTTGTGATGAAAGAAATGAATTAGGATTCGACTCGAGAGAAATTCTTCACCACAGTGATGAAGCAATTTTGTTTAAGATAGACGATGGAATGATCAAAGCAGAGGATGATTACATCCAAcaagctcaagtacaagctcaagatcatgatcTGAAAGGTGCAGCAACATTGTTTACTCTCACAAATTGTACTAGTTGA 903 0.3189 MNNNNITCITRNNSNNNNTTQACAACKYQRRKCAPDCILAPYFPHDKQRQFLNAHKLFGVSNINKIIKYLDPPLKDQAMRTIIFQSDMRANDPVGGCYKYIQDLQAQIEYCKAELDLVHQQLALFRAQAQQQQQVYGGDQVIMNGDSLLGFYNQGSIVSANNPHYQYNIQQMVPQQEQEQYLMMHESNSSIHNSPLQQHINSWAMQSSISLSSLSLHGQSSNASDEYDHKQILDIPCDERNELGFDSREILHHSDEAILFKIDDGMIKAEDDYIQQAQVQAQDHDLKGAATLFTLTNCTS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03100 300 ProSiteProfiles LOB domain profile. 21 122 IPR004883 -
Car07g03100 300 Pfam Lateral organ boundaries (LOB) domain 22 119 IPR004883 -
Car07g03100 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 236 - -
Car07g03100 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 16 236 - -
Car07g03100 300 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03100 Car-Chr7 58160604 58162100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03100 21 131 AS2 family AT3G13850 75.676 2.62e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car07g03100 LOB 2.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03100 - - pvu:PHAVU_010G138500g 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02705 01 52528761 52530059 Car07g03100 07 58160604 58162100 PCT