Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03091 ATGGGACATCACTCTTGTTGCAACAAACAGAAGGTTAAAAGGGGATTATGGTCACCTGAAGAAGATGAAAAACTCATCAAATACATTACAACTTATGGACATGGTTGTTGGAGTTCTGTTCCAAAACTTGCTGGGCTGCAGAGATGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGGCCTGATTTGAAACGTGGAAGTTTCTCACATCAAGAAGCAGCACTCATTATAGAACTCCACACCATTCTAGGCAATAGGTGGGCTCAGATTGCAAAGCATTTACCTGGAAGAACAGATAATGAGGTGAAAAACTTTTGGAATTCCAGCATAAAGAAGAAACTCCTTTCTCATCATGATTTTGTTGTTCCATCTTTTGCCACATTTTCTGATATTCACACCCCCTACAATATTGGTACTATGGAAAGTAATTTCTTCTCTTTTACAGCAAACCCTAATTTGATCCTAAACTTCAATCAAGATCATCTATACCTTCCAACCTCATCATCTCCAAATCCACAAGATTTTCACCAAACTGATACAAAGGTAGACATCAATAACAATTTTAATGCCAATTTTCTTCATCAAAGTCAGAATCCAAATCCAGAAATAGTACTACCATCTAATATTCCTAATTCTTCTTATGAAGATACATGGTCATTGGATTGTGTACCACTTCATCATCACAACAAAAATCAAGAAAATCAAATTTCCAAAATTGATGCCACCCCACTTTTGATTGTTGACAAATTAATCAACCCAATTGAATTAATGCAACAATATGATCATGATCACTTGGTTGAACTTGATCAACACATTGTGCCTAAACTTAGCATTGAGGATTATGCTTGTAGGATCCTAGATTCATCTAATTCTCAAGAACATGAACCTCCAGCAAAAATTCAGTGCTACACACCAATTCAAGCCAATCAATTGGATTACATTGATGCATTGATCATGTCATCATTGCCATCCTCAAGCAGCCAAATATATCAATAG 1002 0.3593 MGHHSCCNKQKVKRGLWSPEEDEKLIKYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSHQEAALIIELHTILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHHDFVVPSFATFSDIHTPYNIGTMESNFFSFTANPNLILNFNQDHLYLPTSSSPNPQDFHQTDTKVDINNNFNANFLHQSQNPNPEIVLPSNIPNSSYEDTWSLDCVPLHHHNKNQENQISKIDATPLLIVDKLINPIELMQQYDHDHLVELDQHIVPKLSIEDYACRILDSSNSQEHEPPAKIQCYTPIQANQLDYIDALIMSSLPSSSSQIYQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03091 333 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Car07g03091 333 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Car07g03091 333 PANTHER TRANSCRIPTION FACTOR MYB26 1 295 - -
Car07g03091 333 PANTHER MYB DOMAIN PROTEIN 55 1 295 - -
Car07g03091 333 CDD SANT 17 61 IPR001005 -
Car07g03091 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Car07g03091 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Car07g03091 333 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Car07g03091 333 SMART sant 66 114 IPR001005 -
Car07g03091 333 SMART sant 13 63 IPR001005 -
Car07g03091 333 Gene3D - 69 116 - -
Car07g03091 333 CDD SANT 69 109 IPR001005 -
Car07g03091 333 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Car07g03091 333 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Car07g03091 333 Gene3D - 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03091 Car-Chr7 58085444 58087057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03091 1 247 MYB Transcription Factor Family AT3G13890 52.941 6.19e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car07g03091 Myb_DNA-binding 6.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03091 K09422 - gmx:100785147 424.861