LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car07g03090	ATGGGTGGTTCTGGAAGCTGGTTTAAATCACTTTTTCCTGTAAGAAAGCCCTCCACAATCTTTTTTTCTTCTTCTCTTCTTGGTGAGAAGAGTAAGAGAAAATGGAAGTTATGGAGGAGTTCTGCAGAAGGTGGTTATGATAAATATTCTTATTCTTCGTTTGTGGTGAATGAAGAAGCATTTGCTGCTGCAATGGCTGCTGTGGTAAGAACTCCACACAAAGATTTCTTGGCAAGAAGAGCTTTGAGGGCCCTAAAGGCAGTGGTGAGGCTGCAAGCTATATTTCGCGGTCGGCTAGTGAGAAAACAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAACAACGCGTCAAAGCAAGGAATGTGGAGAATTCTCCAAAAAGAAATGCTATGCAGAAAATATCAAATGAGCAACTTATCCAAGCTGATCCAGTTAAACAAGCTGAGCAAGGGTGGTGTGACATACCAGGAACTGTGGAAGAAGTTAAAGCAAAACTAAATGTGAGACAAGAAGGAGCAATTAAGAGGGATAGAACAATGACTTACTCTAACTCCACCCAGCAATCAACAGTGAGTTCTAGTCCAAACTCAAGAGCTTCTAAGCCATTGACTCCTCTCAAGAACCGCGGATTAGATGGTAAGAGCATGTTAGAACGCTGGATTGCAGCTAAGCCATGGGAGAGCAGGTTGATGGGAGATATCTACTTGGACTCACCTGACATGACTCCAATGTCAAAGAAAACCGATGAACCATTTAACTCATATCAACAAAATGGATTAGTCAAAGCAAGAAAGAATGGTGTAACAACCAGGATTTCAACTAAATCTCTACCAACAAGCCAATCAACTCCTTCATCTTCAGCCATAAGCTCTGAATGCATGTATGATGATAGCCCTTTATCAACTTCATGCACATCTGAATCACTATCTATACCATCTACTAGCACTGCCAATGTGGAACATACAATGGAAAGAAAAATTGGGAAACCAAGCTACACGAATTTGACCGCGTCGACCAAAGCTAAACTGAAAGCTAGAAGACATTCTTCTCAGAATTTGAGGAGACTATTTATGGATGATTGTCAGTTTCATAGCACTAGAACAGATATGCTAAGTGCAGATACTAGAAGCATTTCTGGTTCATATTCTTCAGCTAATATATGGAAGGATCTGTATGCAAGTCCTCTACGAAGAAGTTATCGAAAACGATATGCTTTGGAAGATAAGTAG	1242	0.4098	MGGSGSWFKSLFPVRKPSTIFFSSSLLGEKSKRKWKLWRSSAEGGYDKYSYSSFVVNEEAFAAAMAAVVRTPHKDFLARRALRALKAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQQRVKARNVENSPKRNAMQKISNEQLIQADPVKQAEQGWCDIPGTVEEVKAKLNVRQEGAIKRDRTMTYSNSTQQSTVSSSPNSRASKPLTPLKNRGLDGKSMLERWIAAKPWESRLMGDIYLDSPDMTPMSKKTDEPFNSYQQNGLVKARKNGVTTRISTKSLPTSQSTPSSSAISSECMYDDSPLSTSCTSESLSIPSTSTANVEHTMERKIGKPSYTNLTASTKAKLKARRHSSQNLRRLFMDDCQFHSTRTDMLSADTRSISGSYSSANIWKDLYASPLRRSYRKRYALEDK	413

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Car07g03090	413	MobiDBLite	consensus disorder prediction	181	207	-	-
Car07g03090	413	MobiDBLite	consensus disorder prediction	273	298	-	-
Car07g03090	413	MobiDBLite	consensus disorder prediction	179	214	-	-
Car07g03090	413	ProSiteProfiles	IQ motif profile.	86	113	IPR000048	GO:0005515
Car07g03090	413	PANTHER	IQ-DOMAIN 5-RELATED	76	411	-	-
Car07g03090	413	PANTHER	IQ-DOMAIN 5-RELATED	1	77	-	-
Car07g03090	413	PANTHER	IQ CALMODULIN-BINDING MOTIF PROTEIN	76	411	-	-
Car07g03090	413	PANTHER	IQ CALMODULIN-BINDING MOTIF PROTEIN	1	77	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Car07g03090	Car-Chr7	58071936	58075017	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car07g03090	1	396	IQD Protein Family	AT1G72670	38.269	4.36e-68	220

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car07g03090	-		-	gmx:100784093	447.203

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car01g02694	01	52453098	52456311	Car07g03090	07	58071936	58075017	PCT

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