Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03084 atgggcggaatgggaaagtcaaccattgctaaagtcttgtttgccaaactctttgcccaatatgactttgtcctctttgctaatgcaaaagaatattcacttagtaagcttctctctgagctgctaaaggaagaaatttccccatctaatgttgtagcatctacattccatatgaggaggctaagaagtaacaagcttttcattgtgcttgataatgtggagagtttagatcagtttcaatatttatgtagggattatggtgagctaagtaagagtagtagactcattataacaacaagagacagacaattgctcagtggaagagttcactgtatatatgaggtcaagcaatgggaagataaagaatctctagagctttttagcatagaagccttcaaacaaagccatcctgaaaagggttttgaggagctctctcaaagggcaattgcttatgcgggaggagttcctatggctttgaaagttttgggttcaaatctccgttccaaagatactgttttttggaaaagtactttcagaaaactcgatatgtttccgaaagaggaaattcaaaaagttttaaaagtgagctatgatggattagatccactagagaagaagatatttctggacattgcattttttttcaaaggagagaagaaagatcatgtcataaggatactagatgcctgcggcttggaagcaagcagtggaatagaagtccttgaagacaaagctttgataactatttcaaatgacagtaaaatacaaatgcatgacttgctaaaaaaaatgggttcggacataatacggaaagaaTGTGGCTTAAACCCTGCAACACATATTCGACTGAGCGGGAGTGAAGCTCTTGAAGTAATTAAACAAAACAAGgggactagttcaattgaaggcataacattggatttgtctCAAAATAATGATTTTCCTTTATGTTCTGACACATTCACCAAGATGAAAGCCTTAAGAATTTTAAAATTCTATATCCCATTGGGTCAGAGTTGTAATAATGCATACCTCAACCTTCCCATAGTTCTTGAGCCATTTTCTAACGAACTGAGGTATTTTGAGTGGATTGGATACCCTTTTGAGGCTCTTCCACAACATTTTTGCGCCAAGTTTCTCGTTGAGATTCGTATGCCTCACAGCAATGTTCAACGACTATGGCAGGGGATGCAGGAACTTGATACGCTAGAGGGGATTGACCTAAGTGAATGCAGACATTTTGTACAGCTTCCGGATTTGTCTAAGGCATCAAGACTTAAATGGGTTAATCTCTCTGGTTGTGTGAGTCTGGTAGATCTCCACCCATCTGTTTTAGGCGCCGAAACACTTACTAGTTTGATACTTGATAGGTGTACAAAACTTAGGAGCGTTAAAGGTTGGAAACATTTATTTTTTTTGGAAAAGATCAGTATAATTGGCTGCACAAATCTCAAGGAATTTGCAGTCTCCTCAGATTTAATTGAAAACTTGGATTTAAGCAGTACAGGAATCCAAAAACTAGACCTATCAGTCGGGGTTCCGCACAATCTTAAGCGGCTTAATCTAGAGGATTCAAGACTTGAGCATCTTCCAAAGGAGTTACCTAGTCTGAAATATATTAAGGAGCTGAAGATTTCTGGCAGTGGACTAACAGTTAACAAACAACAGCTACATGCCTTGTTTGATGGCTTAAGATCCCTACAAATACTACATTTGAAGGATTGTAATAAAGTGTTTGAACTCCCCGACAACATCAGTGTCCTATCAGAATTACAGGAATTAATGCTAGTTGGTAGCAATGTGATTAGGTTGCCTGAAAGCATCAAGCATCTTCAACAGCTGGAAATTCTGTCTTTGGAGAATTGCAGGGAGATTCAGTACCTTCCAGAGCTTCCCCCTCTCATCAAACTGTTAAATGCCGTTAACTGCATGTCACTGGTTTCAGTGTCAAATCTAAAAACCATAGCAACAAAGATGATGGGAAATGCCAAATACATTTCATTCAGGAACTGTTTGAATTTGAATGGACATTCACTTGACCTTATAATGGAAAGTCTCAATTTAACAATGATGAGTGCCACGTTTCAAAATGTGTCTGTAAGAAGACTTCGTGTGGCTGTTCACAGCTACAACTATACCAGTGTTGAAGCTTGTCTACCAGGAAGAAGGGTTCCAAGGCAGTTCAGATATCAAACTACCACCGAGTCATTCATTACCATTGAACTTCCTAACCATTCTAATTTGCTGGGATTCATTTACTCAGTGGTTGTTTCTCCAGCAGATGGAATGAAGAAAGATGGAGCTAGAATAAAGTGTCAATGCAACTTGGGAGAAGAAGGTATAAAGGCTACATGGCTAAATACTTATGTCACGGAACTGAACTCAGATCATGTTTATCTGTGGTATGATCCATTCCATTGTGACAGCATTCTCAAATTTTATGAACCAAAGCTTTGTTTTGAGTTCTGTATTACAAACGATGCGGGGGAAGTTGATGGTTCAATCTGTATTAAAGAGTGTGGGGTACGACCTGTATGCGTTGATGAACTACAGAGTGTTTTACAggaattggaattggattctgaaaagaaaaatgagttgaagaaggcaatggaattagaatCAGGACATAGGATAATCTTGAAGTCAATTGAAAAGCGTTCCACAAACATTATAGAAGAATCAGACTCAGAGAGCAGTGCTGGAAAAGGTCAACAACATAATACCACAAAGCCTACAAAAGGATTCAGTCGCTTCTTTTCTATTGACAAACTTCTTCATTCATCTTTCCTGAAAGTTTCAAAATCACAAACCAAGTCCAGTGCTGTAAGAGGTAGCAAGGAGAATGCCAAAAACTCTACAGAAGTTGTCAAAAGCAAAGGAAATAAAGAAACACTAGTTGAACCTGATGATACATTGCCTGAATTTGTTGGGTCACAGTCAGATAAAACAAATGAATCTAAGGAAAAATCAAAACCAAAATCAGCAATTTTTAAACTAGAGTCGGTTGAAGAAGATATTGAGAATGAAAGCCACTTAAATGTGGAAATGAGCACCGGATCTTCTAGCAAGGAAACTGGAACAAGTCATGAGGAGAGTATTACAAACTCTGCAGAAGTTTTCAAAAGAAAAGGAAATGTAGCAAGACCAACCGAATCTGACGTTGGATTGCATCTACCAGTAATGTCAGTTGTTGAAGAAAATGCTTCTGATAACAAGTCAAATGAAAACAACTATGATTTGCAAGACAGTTTTGATGAGACCAAGAACAAAGAAGAAAAACCAAATATACAAGGAGGACAAATCATTGTTCCTAACACCAATGATATGATAAATGAACCAGACCAAGAAAAAGAAGATGTACCAATAATGGATCTTAGCAAACCTGAAGGTGAAGAAGATAGATCAGATGAGGATTCTTTTGTTAAACTTGAGAGCATCCTGTTTGGAAGTGCAGAGTCTTCACCAGAAGCAACCTCTTCCACAAGCGATGTTGCTGTAAAAGCAGCTTTGCATAACCTCCAATGCCTATTGGAAAACTCACTCGAATCCATTCTCAGTGACGTGGAACTACAACGGAAATTACACATATCTTTGGAATGCATAAAACAAGCATCCCATGAAAAAGTTTCTCCTAATGTTGCGAAGCTTGTCGAAAACATGACATCCTCGATTAAGGACCTTTTTAAAGACTTCACCTTGAATAAAAAAGTGGTTGAAGATCACATTAGCCGCTTGCAGCAAAGAGAAAAGCTCATGCAGCGAGTGAGAGATGGTAAGAAACAGAAGGACTTGTTGAAGAAAGAAAAGAGTCAGTGTGAGGACGAAAATGAGCGTCTTGAGGAAGAGGGTAAAAAACTGGATGAAAAAATTCGAATTCTTATTGAACAAAAGAAAGGTATTGAGGTGGAAAAGTCCAAGTTGAAGGAGAGCATGGAAATATGTGAAGGTGAAAAGAAGAAATTGGAAGATGAAGCTAAGAATATGATAACTGAAAGCAAAGAACTGATGTCAAGTATTAAGAATTCTAAATCTTTGTATGCTGCTGCCCTGTCAAAGCAGCAGAAGTTGAAGGACAAATGGGAAGGTTTTAGAACAGCTTTTGCAGACAACTATGGAAGCAACTGA 4128 0.3004 MGGMGKSTIAKVLFAKLFAQYDFVLFANAKEYSLSKLLSELLKEEISPSNVVASTFHMRRLRSNKLFIVLDNVESLDQFQYLCRDYGELSKSSRLIITTRDRQLLSGRVHCIYEVKQWEDKESLELFSIEAFKQSHPEKGFEELSQRAIAYAGGVPMALKVLGSNLRSKDTVFWKSTFRKLDMFPKEEIQKVLKVSYDGLDPLEKKIFLDIAFFFKGEKKDHVIRILDACGLEASSGIEVLEDKALITISNDSKIQMHDLLKKMGSDIIRKECGLNPATHIRLSGSEALEVIKQNKGTSSIEGITLDLSQNNDFPLCSDTFTKMKALRILKFYIPLGQSCNNAYLNLPIVLEPFSNELRYFEWIGYPFEALPQHFCAKFLVEIRMPHSNVQRLWQGMQELDTLEGIDLSECRHFVQLPDLSKASRLKWVNLSGCVSLVDLHPSVLGAETLTSLILDRCTKLRSVKGWKHLFFLEKISIIGCTNLKEFAVSSDLIENLDLSSTGIQKLDLSVGVPHNLKRLNLEDSRLEHLPKELPSLKYIKELKISGSGLTVNKQQLHALFDGLRSLQILHLKDCNKVFELPDNISVLSELQELMLVGSNVIRLPESIKHLQQLEILSLENCREIQYLPELPPLIKLLNAVNCMSLVSVSNLKTIATKMMGNAKYISFRNCLNLNGHSLDLIMESLNLTMMSATFQNVSVRRLRVAVHSYNYTSVEACLPGRRVPRQFRYQTTTESFITIELPNHSNLLGFIYSVVVSPADGMKKDGARIKCQCNLGEEGIKATWLNTYVTELNSDHVYLWYDPFHCDSILKFYEPKLCFEFCITNDAGEVDGSICIKECGVRPVCVDELQSVLQELELDSEKKNELKKAMELESGHRIILKSIEKRSTNIIEESDSESSAGKGQQHNTTKPTKGFSRFFSIDKLLHSSFLKVSKSQTKSSAVRGSKENAKNSTEVVKSKGNKETLVEPDDTLPEFVGSQSDKTNESKEKSKPKSAIFKLESVEEDIENESHLNVEMSTGSSSKETGTSHEESITNSAEVFKRKGNVARPTESDVGLHLPVMSVVEENASDNKSNENNYDLQDSFDETKNKEEKPNIQGGQIIVPNTNDMINEPDQEKEDVPIMDLSKPEGEEDRSDEDSFVKLESILFGSAESSPEATSSTSDVAVKAALHNLQCLLENSLESILSDVELQRKLHISLECIKQASHEKVSPNVAKLVENMTSSIKDLFKDFTLNKKVVEDHISRLQQREKLMQRVRDGKKQKDLLKKEKSQCEDENERLEEEGKKLDEKIRILIEQKKGIEVEKSKLKESMEICEGEKKKLEDEAKNMITESKELMSSIKNSKSLYAAALSKQQKLKDKWEGFRTAFADNYGSN 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03084 1375 Coils Coil 1249 1297 - -
Car07g03084 1375 PRINTS Disease resistance protein signature 152 166 - -
Car07g03084 1375 PRINTS Disease resistance protein signature 609 625 - -
Car07g03084 1375 PRINTS Disease resistance protein signature 60 74 - -
Car07g03084 1375 Gene3D - 1 112 IPR027417 -
Car07g03084 1375 Pfam Leucine Rich Repeat 379 396 IPR011713 -
Car07g03084 1375 SUPERFAMILY L domain-like 306 662 - -
Car07g03084 1375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 211 IPR027417 -
Car07g03084 1375 Pfam NB-ARC domain 1 198 IPR002182 GO:0043531
Car07g03084 1375 Pfam C-JID domain 719 849 IPR045344 -
Car07g03084 1375 SUPERFAMILY "Winged helix" DNA-binding domain 188 275 IPR036390 -
Car07g03084 1375 MobiDBLite consensus disorder prediction 951 970 - -
Car07g03084 1375 MobiDBLite consensus disorder prediction 1013 1035 - -
Car07g03084 1375 Gene3D Ribonuclease Inhibitor 493 701 IPR032675 -
Car07g03084 1375 Gene3D Ribonuclease Inhibitor 279 492 IPR032675 -
Car07g03084 1375 MobiDBLite consensus disorder prediction 1080 1094 - -
Car07g03084 1375 Coils Coil 847 874 - -
Car07g03084 1375 MobiDBLite consensus disorder prediction 937 1119 - -
Car07g03084 1375 Gene3D - 118 201 IPR042197 -
Car07g03084 1375 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 1237 IPR044974 GO:0006952
Car07g03084 1375 MobiDBLite consensus disorder prediction 894 915 - -
Car07g03084 1375 MobiDBLite consensus disorder prediction 1257 1281 - -
Car07g03084 1375 MobiDBLite consensus disorder prediction 982 1012 - -
Car07g03084 1375 Coils Coil 1305 1339 - -
Car07g03084 1375 PANTHER NB-ARC DOMAIN PROTEIN 1 1237 - -
Car07g03084 1375 MobiDBLite consensus disorder prediction 892 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03084 Car-Chr7 57975614 57985147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03084 1 860 WRKY Transcription Factor Family AT5G45050 27.620 2.25e-72 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03084 - - cam:101515491 2665.18