Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03081 ATGACACGGGGAAGGATAAGGGCGAGGTTCCGAAGGAGCCATTTTTACACATTTGGTTGTCTTCGACCTTCTGCCACTGAAGAGGGGCCACATCCACTTCAAGGTCCCGGGTATTCGCGAACTGTGCACTGCAACCAGCCTCAGCTTCATGAGAAGAGACCGCTACATTATTGCAGGAATGATATTTCCACAACCAAATACAATGTGCTTACATTTTTTCCCAAGGCACTTTTTGAACAGTTTCGTAGAGTTGCTAATATATACTTTCTTTTGGCTGCGTGCCTTTCGGCCTCTCCAATTTCACCTTTTAGTCCACTTAGTATGATTGCTCCTTTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTCACGCAGGTTTGTTCAGGATGTTAAAGTTAATCACCGGAAAGTTAATCAACATAAAGGCGATGGCGTTTTTGGTCACAGGTCGTGGCAGAACATTATGGTTGGGGATGTAGTAAAAGTAGAAAAGGATAAGTTTTTTCCAGCAGATTTGCTTCTCTTGTCATCAAGTTATGAGGATGGGATATGTTACGTCGAGACAATGAATTTAGATGGTGAGACCAACTTGAAGGTAAAAAGATCTTTGGAATCTACCTTGGCCCTAGATAGTGATGCTGCTTTTAAGGATTTCACTGGAACAATAAGATGTGAAGACCCAAACCCCAATCTTTACACTTTTGTTGGAAACTTTGAGTACGAGCGCCAGGTTTATCCTCTTGATCCTAGTCAAATTCTCCTTCGAGACTCTAAGCTTAGGAACACTGATTACATCTATGGAACGGTCATTTTCACTGGTCATGACAGCAAAGTCATGCAGAATTCCACAAGATCCCCTTCAAAAAGGAGCACAATAGAAAAGAAGATGGATTATATCATATACACTCTCTTCACTGTCCTTATCTTTATATCTGTTATTAGTGCCATAGGATTTATTGTCAAGACTAAGTACCAAACCACAAAGTGGTGGTACATACGCCCTGACGATATCGAATACCAGTATGATCCCCAGAAAATTGGATTGGCTGGGATGAGTCATTTGATTACTGCTCTCATTCTCTATGGATATTTGATACCCATCTCACTCTATGTTTCCATTGAGGTTGTGAAGGTTCTACAGGCAACCTTCATTAACCAAGACATTCAAATGTATGATGAAGAAACTGGAACTCCAGCTGATGCAAGGACTTCAAATTTGAATGAAGAGTTGGGCCAGGTGGATACAATTCTCTCCGATAAAACTGGAACTTTAACCTGCAATCAGATGGACTTCCTTAAGTGCTCCATTGCTGGTACTCCATATGGTGTGCGTTCTAGTGAAGTTGAAGTTGCTGCAGCGAAGCAGATAGCTTCTGATCTTGAGGACGCGGATTCAGAGCTGTCCAATTTCCCCATGCCTAATAAGAAAGCCCATGTTTCATGGGAAAATTTTGGAAAAGTTGATGAAATCGAACTAGAGACTGTTGTTACTTCCAAAGGTGATGAGGATCAAAGGCAGGCCATAAAGGGTTTTGGTTTTGAAGATGACCGTCTCATGAATGGTAATTGGTTGGAAGAGCCCAATGCCGATGACATTTTATTATTTTTCCGAATACTAGCAGTTTGCCATACTGCCATTCCTGAGCTGAATGAGGAGACAGGAGGTTTTACATATGAAGCTGAGTCTCCAGATGAAGGGGCTTTTCTTGTAGCAGCAAGGGAATTTGGCTTTGAGTTTTGTAGGAGGACTCAGTCAAGTATTTTCACACGTGAAAGAATTTCTGCTTCAGGGCAAGTGGTGGAAAGGGAGTACAAACTCTTGAATCTACTAGATTTCACAAGTAAAAGAAAGCGTATGTCAGTGATTGTCCGTGATGAGGAGGGAAAACTTTTTCTTTTTTGCAAAGGGGCTGACAGTATCATATTTGATCGTTTGTCCAAGAATGGAAAAATGTATTTGGAGGCTACTACTAGACATTTAAATGATTATGGAGAAGCAGGTTTGCGAACACTAGCTCTGGCATATAGAAGGCTCGAAGAAAAAGAGTACTCGGATTGGAACAATGAGTTTCAGAAAGCCAAAGCATCTGTTGGGACTGACAGAGAGGCAATGCTTGAGCAGGTATCAGAGACTATGGAAAAAGAGCTGATTCTTGTTGGGGCAACTGCTGTAGAAGACAAACTGCAGAACGGGGTTCCTGAGTGTATTGATAAACTTGCTCAAGCTGGTCTCAAGATTTGGGTATTGACAGGGGATAAGATGGAAACTGCAATCAACATTGGTTTTTCCTGCAGTTTGCTTCGACAGGGCATGAAGCAGATCTGTATAACAGCGAATTTAGACTCAGTATCCAGTGATGTCAAACAGTTCTTTTGTTTAACACCGCAGGCCATCAAGGACAGCATATTAAATCAAATCACCAATGCTACACAAATGATAAAGCTGGAGAAGGATCCCCATGCTGCATTTGCATTAATTATCGACGGGAAAACTCTGACATATACTTTAGAAGATGACGTGAAACACCAGTTTTTGGGACTGGCAGTTGATTGTGCATCTGTCATCTGTTGTCGTGTTTCTCCCAAGCAAAAGGCACTGGTCACAAGGTTGGTAAAAGAAGGAACTGGGAAGACCACTCTCGCAATAGGTGATGGTGCAAATGATGTTGGCATGATACAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCCAGTGACTTCTCGATTGCCCAGTTTCAATTTTTAGAGCGGCTTCTGGTGGTTCATGGACACTGGTGCTACAAGAGAATTGCGCAGATGATCTGTTATTTCTTCTACAAGAATATAGCCTTTGGCCTCACCATCTTCTATTTTGAGGCCTTTACTGGCTTCTCTGGCCAATCGGTTTATGATGACTGGTACATGATCTTGTTTAATGTTGTTCTGACATCGTTACCCGTCATTTCACTTGGCGTTTTTGAACAAGATGTTCCATCGGAAGTTTGCTTACAGTTTCCCGCACTATACCAACAAGGACCCAAAAATTTGTTCTTTGATTGGTACAGAATATTGGGATGGATGGCCAATGGTTTATATTCCTCCCTCGCCATCTTCTTCCTCACGGTCACCATATTCTACGATCAACCATTCCGTATTGATGGCCAGACAGCTGACATGGCTGCGGTCGGAACAACAATGTTCACTTGCATCATTTGGGCAGTCAACTGCCAGATCGCACTGACAATGAGCCATTTTACATGGATTCAGCATCTATTTATATGGGGTAGCATACTTACCTGGTACCTCTTTCTCGTGTTATATGGCACACTTTCTCCAGACCTTTCCAAAAGTGCTTACCATTTACTTGTTGAAGCTCTTGGACCTGCACCTATTTATTGGTCAGCAACACTTATAGTTACAATTACATGCAATCTTCCTTATCTTGTCCACATATCCTTCCAAAGATGTTTTAATCCCATGGATCACCACATTATCCAAGAAATCAAGCACTACAAGAAAGATATTGAGGATCAACACATGTGGACGAGGGAGAGTTCTAAAGCCAGACAAGAAACCAAGATTGGGTTCACTGCAAGAGTGGAAGCAAAGATCAGACAATTGAAGGGAAAGCTGCAGAAAAAACAATCTTTCTTGTCTGTTTTGTCCCCATCACGTACATAA 3699 0.4204 MTRGRIRARFRRSHFYTFGCLRPSATEEGPHPLQGPGYSRTVHCNQPQLHEKRPLHYCRNDISTTKYNVLTFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFVQDVKVNHRKVNQHKGDGVFGHRSWQNIMVGDVVKVEKDKFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLESTLALDSDAAFKDFTGTIRCEDPNPNLYTFVGNFEYERQVYPLDPSQILLRDSKLRNTDYIYGTVIFTGHDSKVMQNSTRSPSKRSTIEKKMDYIIYTLFTVLIFISVISAIGFIVKTKYQTTKWWYIRPDDIEYQYDPQKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTPYGVRSSEVEVAAAKQIASDLEDADSELSNFPMPNKKAHVSWENFGKVDEIELETVVTSKGDEDQRQAIKGFGFEDDRLMNGNWLEEPNADDILLFFRILAVCHTAIPELNEETGGFTYEAESPDEGAFLVAAREFGFEFCRRTQSSIFTRERISASGQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGKLFLFCKGADSIIFDRLSKNGKMYLEATTRHLNDYGEAGLRTLALAYRRLEEKEYSDWNNEFQKAKASVGTDREAMLEQVSETMEKELILVGATAVEDKLQNGVPECIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITANLDSVSSDVKQFFCLTPQAIKDSILNQITNATQMIKLEKDPHAAFALIIDGKTLTYTLEDDVKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFQFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMANGLYSSLAIFFLTVTIFYDQPFRIDGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFIWGSILTWYLFLVLYGTLSPDLSKSAYHLLVEALGPAPIYWSATLIVTITCNLPYLVHISFQRCFNPMDHHIIQEIKHYKKDIEDQHMWTRESSKARQETKIGFTARVEAKIRQLKGKLQKKQSFLSVLSPSRT 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03081 1232 Gene3D - 419 431 IPR023214 -
Car07g03081 1232 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Car07g03081 1232 Gene3D - 720 927 IPR023214 -
Car07g03081 1232 SFLD C1.7: P-type atpase like 405 938 - -
Car07g03081 1232 Pfam Cation transport ATPase (P-type) 546 651 - -
Car07g03081 1232 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Car07g03081 1232 PRINTS P-type cation-transporting ATPase superfamily signature 887 906 - -
Car07g03081 1232 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1173 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Car07g03081 1232 SUPERFAMILY HAD-like 410 931 IPR036412 -
Car07g03081 1232 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1160 IPR023298 -
Car07g03081 1232 Pfam Phospholipid-translocating P-type ATPase C-terminal 915 1165 IPR032630 -
Car07g03081 1232 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1227 - -
Car07g03081 1232 Gene3D - 432 457 IPR023299 GO:0000166
Car07g03081 1232 SFLD p-type atpase 405 938 IPR044492 -
Car07g03081 1232 Gene3D - 590 700 IPR023299 GO:0000166
Car07g03081 1232 CDD P-type_ATPase_APLT_Dnf-like 59 1047 - -
Car07g03081 1232 Gene3D - 113 288 - -
Car07g03081 1232 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Car07g03081 1232 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Car07g03081 1232 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Car07g03081 1232 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 859 968 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car07g03081 1232 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03081 Car-Chr7 57952207 57958783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03081 1 1232 Primary Pumps ATPases AT1G17500 74.230 0.0 1921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03081 K01530 - gmx:100784621 2221.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02690 01 52411846 52418618 Car07g03081 07 57952207 57958783 PCT