Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03070 ATGCAAAGGATTACAGCAGGAGCCACCACCACCACAGCCACGACCGTCATTGCAATTAACGCCGGTCGAAATAGCCAACACGCCGTGAAATGGGCTGTGGATCACATTTTGAAGAAGAATTCAAATTGCATTCTCATTCATGTTCGTACCAAGCCCATGCATTCCAATGATTATTTTGATGATGTTCCTAAACATGGTCGTCCACCGACTCAAGAAGAATTGCATCAATTCTTTCTTCCCTTCAGAGGATTTTGTGCTAGAAAAGGGATAGAGGCAAAGGAATTGGTGTTACATGACATTGATGTTCCCAGTGCGCTTACTGATTACGTTGTTGAAAACTCTATCAACAATATTGTTGTTGGTGCTTGCACTTCCCCTTGGAGTGCTATTATAAGGAGATTTAAAGATATAGATGTGGCATCTACCTTAGCCAAATCTTTGCCAGAATCATGCACATTGTATGTTATATCAAAAGGAAAAGTACAAAATATTCGACCAACAGGGAATCCTATTCCTCATCATCAAAAGAATAATCAACCTCAAAATGATGAAGCCACACCAACAAGATCTATAAGAGACATATTTACACTCTTGCAGAATGCTCAATTGATTAATCGAAATAAGTTTCTTGCTGATTCCCTTGATTATGAAGATGTAAACAGGAAACCATTGAAAGATGCCATTGATAGAGACAACAGTATCAAAGTTTGGGAATCATTACATGATATGAAAGAAGGTATACTAATGACACCACATAATAATAAACCCAATATTGATGATTTAACTTCACCAAGAGGAAGCTCATCATCACTAACTTCATCAAATAGAAGTTCTCCTTCCAATAGTACTGACAGTTATGCAGGGAGACATGGAAATCATGAAGGAATAAACTCAGACAGTTCTAAGGGCTTATTTTCTTCAAAGCCACCAGTAAGCATCGAGGCAGAAATCAAAAAATTAAAACTAGAACTGAAGAAAACATCAGAGCAATATGGTATGGCTTGCAGAGAAGTTGTTTTAGCAAAACTGAAGGCAACGGAGCTCGAAAACTTTAGACGAGAAAAAGTACACAATGTAGAAAAAGCAAGGCAAGCTGAAGAGGCTGCATTAGCTTTGGCAGAAGAAGAAAGACAGAGAGCGAAGGCGGCTTTGGAGTCAGCAGAAATGTCAAAACGCCTTGCAGAAATGGAAACTCAAAAGAGAAAGCTAGCCGAGTTAAAAGCGAAACACGAGGAAGAAGAGAGGAGAAGGACATTACAAAAAGTTGTGTATAATAGCATTCCATATAGAAGATACGATATTAAAGAAATTGAGGTTGCAACTAATGGTTTTGACAATGCACTTAAAATTGGTGAAGGAGGGTATGGACCTGTTTTTAAAGGAGTGCTTGATCACACTGTTGTTGCCATAAAGGTTCTTAGACCAGATTTAGCACATGGAGAAAGGCAATTTCAACAAGAGGTTCTTGTTTTGAGCGCCATAAGACATCCCAACATGGTACTCCTTCTAGGTGCATGTCCAGAGTTTGGTTGCCTTGTGTATGAACACATGGAAAACGGTAGTTTAGAAGATCGTTTATTCCACAAAGACGGCACTCCACCGATTCCATGGAACAACCGTTTCAAAATTGCATTAGAAATTGCCACTGGCCTTCTTTTCCTTCATCAAAGAAAGCCTGAGCCACTAGTCCACCGCGATCTTAAACCAGCAAACATTCTCTTAGACAGAAACTATGTCAGCAAGATCAGCGATGTTGGTTTGGCGCGACTTGTTCCGCCTTCGATAGAGAACAAAACAACTCAATATCGATTGACAGGTGCAGCTGGAACATTTTGTTACATTGATCCAGAATATCAACAAACTGGAATGTTGGGTGTGAAATCGGATATATATTCATTAGGTATGGTTTTGCTACAGATTATTACTGCAAAGCCTCCAATGGGTTTGTCACATTTGGTTGAAGAGGCTATACAAAAAGGGAACTTCAGTGATGTGCTTGATCCAAGTGTTCCTGATTGGCCTATTGAAGAGGCTTTGTCATTTGCAAAGTTGGCATTAAAGTGTTGTGAGTTGAGAAAACGGGATAGACCTGATCTTGGTACTGTTATTTTGCCTGAGCTTAATAGAATATCACAGATTTGGGAATGTGATGAGGATTGA 2160 0.3944 MQRITAGATTTTATTVIAINAGRNSQHAVKWAVDHILKKNSNCILIHVRTKPMHSNDYFDDVPKHGRPPTQEELHQFFLPFRGFCARKGIEAKELVLHDIDVPSALTDYVVENSINNIVVGACTSPWSAIIRRFKDIDVASTLAKSLPESCTLYVISKGKVQNIRPTGNPIPHHQKNNQPQNDEATPTRSIRDIFTLLQNAQLINRNKFLADSLDYEDVNRKPLKDAIDRDNSIKVWESLHDMKEGILMTPHNNKPNIDDLTSPRGSSSSLTSSNRSSPSNSTDSYAGRHGNHEGINSDSSKGLFSSKPPVSIEAEIKKLKLELKKTSEQYGMACREVVLAKLKATELENFRREKVHNVEKARQAEEAALALAEEERQRAKAALESAEMSKRLAEMETQKRKLAELKAKHEEEERRRTLQKVVYNSIPYRRYDIKEIEVATNGFDNALKIGEGGYGPVFKGVLDHTVVAIKVLRPDLAHGERQFQQEVLVLSAIRHPNMVLLLGACPEFGCLVYEHMENGSLEDRLFHKDGTPPIPWNNRFKIALEIATGLLFLHQRKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSIENKTTQYRLTGAAGTFCYIDPEYQQTGMLGVKSDIYSLGMVLLQIITAKPPMGLSHLVEEAIQKGNFSDVLDPSVPDWPIEEALSFAKLALKCCELRKRDRPDLGTVILPELNRISQIWECDED 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03070 719 ProSiteProfiles Protein kinase domain profile. 444 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03070 719 Pfam Protein kinase domain 448 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03070 719 PANTHER OS02G0152300 PROTEIN 14 713 - -
Car07g03070 719 Gene3D Transferase(Phosphotransferase) domain 1 517 716 - -
Car07g03070 719 CDD STKc_IRAK 450 710 - -
Car07g03070 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Car07g03070 719 MobiDBLite consensus disorder prediction 164 186 - -
Car07g03070 719 MobiDBLite consensus disorder prediction 255 288 - -
Car07g03070 719 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 14 713 - -
Car07g03070 719 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 123 - -
Car07g03070 719 Coils Coil 356 416 - -
Car07g03070 719 SUPERFAMILY Protein kinase-like (PK-like) 419 702 IPR011009 -
Car07g03070 719 SMART serkin_6 444 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03070 719 Gene3D HUPs 13 157 IPR014729 -
Car07g03070 719 CDD STK_N 22 159 - -
Car07g03070 719 Gene3D Phosphorylase Kinase; domain 1 423 516 - -
Car07g03070 719 MobiDBLite consensus disorder prediction 248 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03070 Car-Chr7 57774096 57779258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03070 6 715 Receptor kinase-like Gene Family AT1G78940 47.099 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Car07g03070 Pkinase 1.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03070 - - gmx:100799611 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03070 07 57774096 57779258 Car07g03070 07 57774096 57779258 ECH
Car07g03070 07 57774096 57779258 Car01g02683 01 52351936 52354684 PCT