Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03065 ATGTTTTCCGTGGCTAAAATGAACATGAGTGTGGATGAGGAAGAAGAATCTGATGAAGAGATTCAAGTCCCAGCTGAGATTGATTGGCAAATGCTTGATAAATCAAGGTTTTTCTTCCTTGGTGCTGCTTTATTTTCTGGTGTTTCAGCAACACTTTACCCTGTTGTTGTTTTGAAAACTAGGCAGCAAGTTGCTCAGTCACAAGTTTCTTGTATTAAGACTGCATTTTCATTGATTAAGGGTGAGGGGTTTCGAGCATTGTATCGCGGGTTTGGTACATCGTTGATGGGTACAATACCGGCTAGAGCTTTATACATGGCTGCTCTTGAGGTTACTAAGAGTAATGTAGGGACTGTTACTGTTGGTTTTGGTcttgctgaaccaactgctgctgcaattgctaatgcagttgctggtttgagtgcagctttagcagctcaacttgtgtggaccccagttgatgttgtgAGTCAAAGGTTGATGGTTCAAGGTGGTTGTAATTCAAGTGATCCTAAGGCTTCTTCTGTTAGATATGTTAATGGAATCGATGCATTTAGGAAAATTCTTAGGACAGATGGTCCTAGGGGTTTGTATAGAGGTTTTGGGATATCAATTTTGACTTATGCGCCTTCAAATGCTGTTTGGTGGGCTTCTTATTCTGTTGCACAAAGGATGGTTTGGGGTGGAGTTGGATATTACTTGAGTAACAAGAAAGGTGGTGGGGAGGGAAGTGATAACAATGGGGCAAATGCGTTGAGGCCGGATACGAGAACTATTATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCGGGAGGTATGTCTGCATTGATTACTATGCCATTGGATACAATTAAGACAAGGCTGCAGGTCTTGGATGGCGATGAGAATGGCCGTCGTGGGCCGACGGTGATGCATACGGTTAGAAATTTGGTTAAGGAAGGTGGTTGGATGGCTTGTTATAGAGGATTGGGACCTAGATGGGCTTCAATGTCTGTGTCTGCAACAACAATGATCACAACCTATGAGTTTCTAAAACGGATTTCCGCTAAGAGTAATGAGGTTTTGACATGA 1071 0.3894 MFSVAKMNMSVDEEEESDEEIQVPAEIDWQMLDKSRFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTAFSLIKGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTVTVGFGLAEPTAAAIANAVAGLSAALAAQLVWTPVDVVSQRLMVQGGCNSSDPKASSVRYVNGIDAFRKILRTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLSNKKGGGEGSDNNGANALRPDTRTIMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMHTVRNLVKEGGWMACYRGLGPRWASMSVSATTMITTYEFLKRISAKSNEVLT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03065 356 Gene3D Mitochondrial carrier domain 37 354 IPR023395 -
Car07g03065 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 115 IPR018108 -
Car07g03065 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 225 IPR018108 -
Car07g03065 356 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 10 353 - -
Car07g03065 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 258 347 IPR018108 -
Car07g03065 356 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 353 - -
Car07g03065 356 SUPERFAMILY Mitochondrial carrier 30 344 IPR023395 -
Car07g03065 356 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Car07g03065 356 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Car07g03065 356 PRINTS Mitochondrial carrier protein signature 267 289 IPR002067 GO:0055085
Car07g03065 356 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Car07g03065 356 Pfam Mitochondrial carrier protein 44 115 IPR018108 -
Car07g03065 356 Pfam Mitochondrial carrier protein 263 351 IPR018108 -
Car07g03065 356 Pfam Mitochondrial carrier protein 132 226 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03065 Car-Chr7 57659218 57660646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03065 14 353 Chloroplast and Mitochondria Gene Families AT1G72820 73.761 1.73e-179 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03065 K15121 - gmx:100784616 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03065 07 57659218 57660646 Car07g03065 07 57659218 57660646 ECH