Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03053 ATGAACAAGACCAAACGTGAATCCATTAGTAGCATAAGTTTATTTATTTATTATCTAACTCTCTTGCTTATTTCAAAACCAAGGGGTGTAGTTACAGACAAAATTTCAATTTCAAACAAGCATTACTATTCAACAAGTCCTGTGATATTTTCTCCTACCATCTCAGTCCCTCAGATAAAATATGATGTCTTTGTTAGCTTCAGGGGTGTTGATATTCCCAAAAATTTCCTTGGCGATTTCCTTAAGGCTTTGTCACGAAAAAAAATCGCTGTCTTTTCCGACAAGAACCTTAAAACAGGAGATGAAATATCCACACTTGGAGCAATTGAAGATTCATTGATTTCATTGGTCATATTCTCCCCAAACTTTGCATCTTCACAATGGTGTTTGGATGAGCTTGTGAAAATAGTTGAGTGCAGAGCAAGGTATGGTAGTATTGTAATACCAGTTTTCTACCATGTGGATCCAAAAGTTGTACGGCAACAACATGGGGCTTATGGTGATGCTTTTGCTCAACATGAACAAAAGTATCCTTTGAGTAAGGTGCTAAGCTGGAGATCTGCTTTGAAGCAATGTGCCGATATTTCAGGATTAGATTCATCAGTTTTTTCGGATGATGCTGAGCTTGTTGAAGAAATACTTAAGATTGTGTTGATGAAGTTGAATCAAGTGGACCAAGTTAAGCCAAAAGGACTTGTAGGAATTGAAAGGCAAATTTCACCTATAAAATCATTGTTACATTTAGAGTCAGAAGAAGTTCTTGTTCTTGGAATTTGGGGTATGGCTGGTATAGGTAAAACAACTATTGGTGAAGAAGTATTTCGTAGACTTCATTCTGAATACGAAAGTTGTTATTTTATGGCTAATGTAAGAGAAGAATTAGAAAGATGGGGCACAAACAGTTTGAAGTTAAGAAAAAATCTTTTATCCACTTTATTAGAAGAAGACTTGAAAGATGACATGATAAATGGATTATCTCCTTTGGTTAAGAAAAGGCTTAGCCGCATGAAGGTTCTTATTGTTCTTGATGATGTCAAAGATGCTAAGCAACTAGAAGTTTTTGTTGAAATAGTTTATTCATTAGGACCAGGAAGTAGAATCATCATAACTACTAGAGATAAGCAAGTACTTGCTGGAAAAGTTGATGATATATACGAGGTTGAGCCATTGGACTCTGATGAATCTTTCGAGCTTTTCAATTTGCATGCCTTTAAAAAACTAGAGCATCTTGAAATGGAGTACTATAATCTATCAAAGAAGATGGTAGATTATACTAAAGGCATTCCATTAGTTATTAAAGCTTTAGCTAACCACCTTTGTGGAAAAGATAAGGCTATATGGGAAACAAAGCAGATTAAAATATTCAATGAGATTATTAGATTGATGTACAATGACCTTGACTATTATGAAAAGAATATATTCTTGGATATTGCCTGCTTTTTTGACGGATTGAATTTCAAAGTTGACCTCATAAAACTTCTATTGAAAGATCCTTATTGTTCAGTGGGCTTTATATTAGACAGGCTAAAAGATAAAGCTCTCGTAACTATTGACAAACAAAATGTTGTGTCAATGGATGACATAATACAAGAAACAGCTCGGAAGATTGTTCGACAAGAATCTGTTGAAGAACCTGGGAGCCGTAGCCGACTATTGGATCCGGATGACATTTATCATGTACTGAAAGACGACCAGCAGGGAAGTAAGGCCATCAGAAGTATGGCCATCAACCTATCAAAAATGAAGGAGCTGCAGTTAAACCCCCAAGTATTTGCCAAGATGAACAGAATGAAATTTTTGGATATTTATACTACGGGGTCTCATAATCAAAGGAGTTTGTCTCTTCCTCAAGGGCTTGAATTCTTACCTAATGAACTAAGATATCTTCGTTGGGAGTATTACCCTTTGGAATCCTTACCATCCAAGTTTTCTGCAGAAAACCTTGTCACACTGAACTTGCCTTATAGCCAACTGAAAAAACTTTGGCATGGAATGAAGGATATTGCGAATTTGAATGTCCTTATACTCCATTCATCCACACTCCTAACAGAACTCCCAGACTTTTCAAAGGCCACAAATCTTACAGTAATGGATCTCCATTTCTGTGTAGGGTTGATTAGTGTCCATCCCTCAGTTTTCTCTCTCAAAAAGCTGGAGAAACTGGACCTGAGTGGATGCATTTCCCTTACAAGCCTTCAAAGTACTACTCATTTAGGCTCCCTTAGTTCTCTATCCCTCTACAACTGCACAGCACTGAGGGAATTCTCAGTGACCTCAAAGAATATGAACCAATTGAATTTAGAACACACTGGTATCAAACAACTACCTTCGTCATTTGGACTTCAAACCAAACTTGAAAAGTTACATCTAGGACACACTCACATTGAGACCTTGCCTAAAAGCATAAAAAATCTTACAAGGTTGAGACATCTCGACTTGCATCATTGCGGGGAGCTTCAAACTCTACCAGAGCTTCCCCCGTCGGTAGAAACACTAAATGTTGATGGGTGTATATCACTGGAGAATGTAGCGTTCGGTTCAACTACTAGTGAACAACTTAAGGAAAAGAAGAAAAAGGTCACATTCTGGAATTGCCTTAAATTAAATGAACCTTCTCTCAAGGCTATTGAGTTGAATGCGCAAATTAACATGATGAACCTTTCACACCAACATATATCCAcatgtgatggtgattgtgatcatgatcatgatcatggtcaaggAATGTACGTGTATCCAGGTAGCGAGATTCCAGAGTGGTTGGAATATAGTACAACTACACATGACTACATAACTATTGATCTTTCTTCTGCTCCTTATTTCTCTCAGTTGGGCTTCATTTTTGGCTTCATCATTCCAACCATCTCATCAGAGGGTTTGACTCTAACATTTAAAATCAgtgatggtgacggtgaagacgaaggtgaaggtATAAAAGTGTACTTGGACAGACCGCGTCAAGGAATTGAATCGGATCATGTGTATCTAATGTCCGAGCCAAGATGTTCACATTACCTAGCTAGCCGAGCCAATGATCAGTCAAAGATTAAAATTAAGGTTAGAGCAGCATCAAGAACACTGACATCAGGGTACATGCCAGTGCAGTTAAGAGGATTTGGAGTTAGCCTAATAACCCCTTCAAAATATGACAAGTTTAAACAGCAATTGGAGTTGGGTGATGGTAGTGTTATTCCAAATAATATGTGTTCAGTTGAAGAGGGACCAAATTTTCTAGGAATTTAA 3243 0.3639 MNKTKRESISSISLFIYYLTLLLISKPRGVVTDKISISNKHYYSTSPVIFSPTISVPQIKYDVFVSFRGVDIPKNFLGDFLKALSRKKIAVFSDKNLKTGDEISTLGAIEDSLISLVIFSPNFASSQWCLDELVKIVECRARYGSIVIPVFYHVDPKVVRQQHGAYGDAFAQHEQKYPLSKVLSWRSALKQCADISGLDSSVFSDDAELVEEILKIVLMKLNQVDQVKPKGLVGIERQISPIKSLLHLESEEVLVLGIWGMAGIGKTTIGEEVFRRLHSEYESCYFMANVREELERWGTNSLKLRKNLLSTLLEEDLKDDMINGLSPLVKKRLSRMKVLIVLDDVKDAKQLEVFVEIVYSLGPGSRIIITTRDKQVLAGKVDDIYEVEPLDSDESFELFNLHAFKKLEHLEMEYYNLSKKMVDYTKGIPLVIKALANHLCGKDKAIWETKQIKIFNEIIRLMYNDLDYYEKNIFLDIACFFDGLNFKVDLIKLLLKDPYCSVGFILDRLKDKALVTIDKQNVVSMDDIIQETARKIVRQESVEEPGSRSRLLDPDDIYHVLKDDQQGSKAIRSMAINLSKMKELQLNPQVFAKMNRMKFLDIYTTGSHNQRSLSLPQGLEFLPNELRYLRWEYYPLESLPSKFSAENLVTLNLPYSQLKKLWHGMKDIANLNVLILHSSTLLTELPDFSKATNLTVMDLHFCVGLISVHPSVFSLKKLEKLDLSGCISLTSLQSTTHLGSLSSLSLYNCTALREFSVTSKNMNQLNLEHTGIKQLPSSFGLQTKLEKLHLGHTHIETLPKSIKNLTRLRHLDLHHCGELQTLPELPPSVETLNVDGCISLENVAFGSTTSEQLKEKKKKVTFWNCLKLNEPSLKAIELNAQINMMNLSHQHISTCDGDCDHDHDHGQGMYVYPGSEIPEWLEYSTTTHDYITIDLSSAPYFSQLGFIFGFIIPTISSEGLTLTFKISDGDGEDEGEGIKVYLDRPRQGIESDHVYLMSEPRCSHYLASRANDQSKIKIKVRAASRTLTSGYMPVQLRGFGVSLITPSKYDKFKQQLELGDGSVIPNNMCSVEEGPNFLGI 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03053 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 56 1073 IPR044974 GO:0006952
Car07g03053 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 225 477 IPR027417 -
Car07g03053 1080 Gene3D Ribonuclease Inhibitor 760 862 IPR032675 -
Car07g03053 1080 Pfam NB-ARC domain 243 451 IPR002182 GO:0043531
Car07g03053 1080 Gene3D - 389 467 IPR042197 -
Car07g03053 1080 SUPERFAMILY Toll/Interleukin receptor TIR domain 51 197 IPR035897 -
Car07g03053 1080 Pfam Leucine Rich Repeat 647 664 IPR011713 -
Car07g03053 1080 Gene3D - 58 222 IPR035897 -
Car07g03053 1080 Gene3D Ribonuclease Inhibitor 559 759 IPR032675 -
Car07g03053 1080 SUPERFAMILY "Winged helix" DNA-binding domain 457 562 IPR036390 -
Car07g03053 1080 Pfam TIR domain 60 227 IPR000157 GO:0007165
Car07g03053 1080 ProSiteProfiles TIR domain profile. 59 221 IPR000157 GO:0007165
Car07g03053 1080 PRINTS Disease resistance protein signature 255 270 - -
Car07g03053 1080 PRINTS Disease resistance protein signature 332 346 - -
Car07g03053 1080 PRINTS Disease resistance protein signature 425 439 - -
Car07g03053 1080 PRINTS Disease resistance protein signature 713 729 - -
Car07g03053 1080 SUPERFAMILY L domain-like 575 898 - -
Car07g03053 1080 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 56 1073 - -
Car07g03053 1080 Gene3D - 223 383 IPR027417 -
Car07g03053 1080 SMART till_3 60 195 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03053 Car-Chr7 57534855 57545716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03053 61 841 WRKY Transcription Factor Family AT4G12020 34.969 2.52e-117 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03053 - - mtr:MTR_8g020360 1460.28