Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03052 ATGAACAATCGTGAGTTCTGTAGTAGCTTAAGTTTATTTGTTTATGTCACTCTCTTGCTTATTTCAAAACCGAAAGGCTTATTTGCAACAAGCATAACTCCAACTTCAACAAGTCCTATGATATTGTCTCTTTCTAACTCTGTTCCTAAGATAAAATATGATGTTTTTATTAGCTTCCATGGTAGTGACACCCGCAAAAATTTCCTCAGCCATGTCCTTAAGGCTTTGTCACGAAAACAAATTGCAGTCTTTTCGGACAAGAAGCTTGAAGAAGGAGATGATCTATCAACTCTTTTTGGAGCAATTGAAAGTTCATTAATTTCATTGGTCATATTCTCCCCATACTTTGCATCTTCACATTGGTGTTTGGATGAGGTTGTGAAAATACTTGAGTGCAAAGCAAAATATGGTAGGATTCTAATGCCAATTTTCTACCAAGTGGACCCCATAGTTGTGAGCAATCAAAATGGGACTTATGGTGATGCTTTGGCTGAACATGAAAAAAATTATGATTTCAACAGGGTGCAAAGCTGGAGATCTGCTTTGAAGCAATCTGCTGAGATTTTAGGATTTGATTCATCAGTTTTCCCGGATGATGCTAAGCTTGTTGAAGAAATACTTAAGAGTGTGTTGATGAAGTTGAATCAAGTGGACCAAGTTAAGCCAAAAGGACTTGTAGGAATTGAAAAGCAAATTTCACCTATAAAATCATTGTTACATTTAGAGTCAGAAGAAGTTCTTGTTCTTGGAATTTGGGGTATGCCTGGTATAGGTAAAACAACTATTGGTGAAGAAGTATTTCGTAGACTTCATTCTGAATACGAAAGTTGTTATTTTATGGCTAATGTAAGAGAAGAATTAGAAAGACATGGCACAAATATTTTCAGGTTAAAGAAAAAGCTTTTATCCACTCTATTAGACGAAGAAAACTTTAAAGATGACATGATAAATGGATTATCTCCTTTGGTTAAGAAAAGGCTTAGCCGCATGAAGGTTCTTATTGTTCTTGATGATGTCAAAGATGCTAAGCAACTAGAAGTTTTGGTTGAAATAGTTAATTCGTTAGGACCAGGAAGTAGAATCATCATAACTACTAGAGATAAGCAAGTACTTGCTGGAAAAGTTGATGACATATACGAGGTTGAGCCATTGGACTCTGATGAATCTTTCGAGCTTTTCAATTCGCATGCCTTTAAAAAACTAGAGCATCTTGAAATGAAGTACTATAATCTATCAAAGAAGATGGTAGATTATGCCAAAGGAATTCCATTAGTTATTAAAGCTTTAGCTAACCACCTTTGTGGAAAAGATAAGGCTATATGGGAAAGCCAGGCAAGGAGTCTGAAAAGAGAGCAGATTAAAACAGTCAATGATGTTATTAGATTGATTTACAATGATCTTGACTATTATGAAAAGAATATATTCTTGGATATTGCCTGCTTTTTTGACGGATTGAATTTTAAAGTTGACCTCATAAAACTTCTATTGAAAGATCCTTATTGTTCAGTGGGATTTAGATTAGACAGGCTAAAAGATAAAGCTCTTGTAACTATTGATCAACAAAATGTTGTGTCAATGCATGACATTATACAAGAAACAGCTCGGGAGATTGTTCACCGGCAATCTGTTGAAGAACCTGGAAGATGGACCAGACTATTGGATCCTCGTGACATTAATCAAGTATTGAAAGATGACAAGGGAAGTGAGACCATAAGAAGTATGGCCATTGAACTGTCTGAAATGAAGGAGCTGCAATTAAGCCCTCAAGTATTTGCCAAGATGAGCAAAATGAAATTTTTGGATATTTATACTAAGGGGTCTCATAATCAAAGGAGTTTGTCTCTTCCTAAAGGACTTGAATTCTTACCTGATGAACTGAGATATCTTCGTTGGGAGTATTACCCTTTGGAATCCTTGCCGTCCAAGTTTTCTGCAGAAAACCTTGTCATATTGAACTTGCATAATAGCCAGCTTAAAAAACTTTGGCATGGAGTGAAGGATCTTATGAATTTGAATGTCCTTACACTTCATTCATCCACACTCCTAACAGAGCTCCCAGACTTCTCAAAGGCCACAAGTCTTACAGTAATAGACCTCCGTTTCTGTGTAGGGTTGACTAGTGTCCATCCATCTGTTTTCTCTCTCAAAAAGCTTAAGAAACTGGATCTGACGGGATGCATTTCCCTTACAAGCCTTCAAAGCAATAATACCCATTTAAGCTCCCTTAGTTCTCTATCCCTCTACAACTGCACAAAACTGAAGGAATTCTCATTGACCTCAAAGAATATGAAACAATTGAATTTAGAACATACGGGTATCAAACAACTACCTTCATCAATTGGACTTCAACACAAACTTGAAAAGTTACATCTAGGACACACTCACATTGAGACCTTGCCTAAAAGCATCAAGAATCTTACAATGCTGAGACATCTAGACTTGCATCATTGCAGGGAGCTTCAATCTCTACCAGAACTTCCTCCGTCGATAGAAACACTAGATGTTGGTGGGTGTGTATCACTAGAGAATGTAACGTTCCGTTCAACAGCTAGTGAACAACTTAAGGAAAAGAAGAAAAGGGTCACATTCTGGAATTGCCTTAAGTTAAATGAGCCTTCTCTCAAGGCTATTGAGTTGAATGCACAGATTAATATGATGAACTTTTCACACCAACATATATCCACATGTGATGGTGATCATGATCACGAACACGATCGCAATCAAAACATGTACGTCTATCCAGGTAGCGAAATCCCAAAGTGGATGAAATACAGTACAACTACGCATGACAACATTACTATTGATCTTTCTTATCTTTCTTCTGATCCTTATTTCTCTCAATTGGGCTTCATTTTTGGCTTCATCATTCCAACCATCTCAATAGAGGGTTTGACTCTGAAATTCAAAATCAGTGATGGTGAAAGTGAAACTATCAACGTGTACTTGGACAGACCATATCAAGGAATTGAATCAGATCATGTGTATCTAATGTATGACCCGAGATGTTCGCATTACCTAGCTAGCCGAGTCAATGATCAGTCAAAGATTACAATTAAGGTTAGCGCAGCATCAAGAACACTGACATCAGAGTACATGCCAGTGCAATTAAGAGGGTTTGGGGTTAGCCTTGTAACCCCTTCAAAATATGACAAGTTTAAACATCAATTGGAATTGGATGATGGTAGCGTTATTCCAAATAATATGTGTTCAGTTGAAGAAGGATGA 3225 0.3699 MNNREFCSSLSLFVYVTLLLISKPKGLFATSITPTSTSPMILSLSNSVPKIKYDVFISFHGSDTRKNFLSHVLKALSRKQIAVFSDKKLEEGDDLSTLFGAIESSLISLVIFSPYFASSHWCLDEVVKILECKAKYGRILMPIFYQVDPIVVSNQNGTYGDALAEHEKNYDFNRVQSWRSALKQSAEILGFDSSVFPDDAKLVEEILKSVLMKLNQVDQVKPKGLVGIEKQISPIKSLLHLESEEVLVLGIWGMPGIGKTTIGEEVFRRLHSEYESCYFMANVREELERHGTNIFRLKKKLLSTLLDEENFKDDMINGLSPLVKKRLSRMKVLIVLDDVKDAKQLEVLVEIVNSLGPGSRIIITTRDKQVLAGKVDDIYEVEPLDSDESFELFNSHAFKKLEHLEMKYYNLSKKMVDYAKGIPLVIKALANHLCGKDKAIWESQARSLKREQIKTVNDVIRLIYNDLDYYEKNIFLDIACFFDGLNFKVDLIKLLLKDPYCSVGFRLDRLKDKALVTIDQQNVVSMHDIIQETAREIVHRQSVEEPGRWTRLLDPRDINQVLKDDKGSETIRSMAIELSEMKELQLSPQVFAKMSKMKFLDIYTKGSHNQRSLSLPKGLEFLPDELRYLRWEYYPLESLPSKFSAENLVILNLHNSQLKKLWHGVKDLMNLNVLTLHSSTLLTELPDFSKATSLTVIDLRFCVGLTSVHPSVFSLKKLKKLDLTGCISLTSLQSNNTHLSSLSSLSLYNCTKLKEFSLTSKNMKQLNLEHTGIKQLPSSIGLQHKLEKLHLGHTHIETLPKSIKNLTMLRHLDLHHCRELQSLPELPPSIETLDVGGCVSLENVTFRSTASEQLKEKKKRVTFWNCLKLNEPSLKAIELNAQINMMNFSHQHISTCDGDHDHEHDRNQNMYVYPGSEIPKWMKYSTTTHDNITIDLSYLSSDPYFSQLGFIFGFIIPTISIEGLTLKFKISDGESETINVYLDRPYQGIESDHVYLMYDPRCSHYLASRVNDQSKITIKVSAASRTLTSEYMPVQLRGFGVSLVTPSKYDKFKHQLELDDGSVIPNNMCSVEEG 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03052 1074 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 1073 IPR044974 GO:0006952
Car07g03052 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 478 IPR027417 -
Car07g03052 1074 SUPERFAMILY Toll/Interleukin receptor TIR domain 47 190 IPR035897 -
Car07g03052 1074 Pfam NB-ARC domain 235 456 IPR002182 GO:0043531
Car07g03052 1074 Pfam TIR domain 52 220 IPR000157 GO:0007165
Car07g03052 1074 Gene3D - 383 468 IPR042197 -
Car07g03052 1074 Pfam Leucine Rich Repeat 647 666 IPR011713 -
Car07g03052 1074 Gene3D - 46 213 IPR035897 -
Car07g03052 1074 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 48 1073 - -
Car07g03052 1074 ProSiteProfiles TIR domain profile. 51 214 IPR000157 GO:0007165
Car07g03052 1074 SUPERFAMILY "Winged helix" DNA-binding domain 456 563 IPR036390 -
Car07g03052 1074 SMART till_3 52 188 IPR000157 GO:0007165
Car07g03052 1074 PRINTS Disease resistance protein signature 248 263 - -
Car07g03052 1074 PRINTS Disease resistance protein signature 326 340 - -
Car07g03052 1074 PRINTS Disease resistance protein signature 419 433 - -
Car07g03052 1074 PRINTS Disease resistance protein signature 713 729 - -
Car07g03052 1074 Gene3D Ribonuclease Inhibitor 530 760 IPR032675 -
Car07g03052 1074 Gene3D Ribonuclease Inhibitor 761 886 IPR032675 -
Car07g03052 1074 Gene3D - 214 377 IPR027417 -
Car07g03052 1074 SUPERFAMILY L domain-like 576 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03052 Car-Chr7 57525521 57533827 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03052 53 842 WRKY Transcription Factor Family AT4G12020 34.325 3.19e-116 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03052 - - mtr:MTR_8g020360 1475.3