Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03051 ATGGAAACTGTGGTTGGAATTGAGGATAATGATGATGGGAAGCTTGAAGACAGTGTGGTTGATAGAAGCAGTTCTGCAGCTTTGTCTTCTTCACCCAAAAAAATTTCTAACCCGGTTGTGTACAAACTTGTTCGGGTTGAAGGTGATGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTGGAGGATTTTCTAGAATATGAGAACAGTGAAATGCGTGTTGTTGCAGACACGGGACAGAGTTTGGAATGCATATCAATCGAAAGATCATCTTCTGGAAAGCTTCGATTGGAGTGCTCAGAAGGTGTTTCACAATTAGGCACCGCAGAGGCAGATTTAGGGAAGCTAAATGCAAAGTTTCAGTACATTGAACAGATGCTGCAAAAGGTTAAACAGGAAGAGAGACTTCGCTTGTCGTCTCGATCACCTGTTCATTCTCATGTAAAAATAGATAGCCAGTGTTCTGCTGATAAATTTCCTGTCGTAAATGAGAAGGTTCGGTCTGAAACTCCATACCAGGAAGCACCTTCAATAGCATCGAGTTTAAATTATAGTCATAGTAATCAATCTGGGAGTATTGATCAGTGTTCCAGACCTTCAGAAGGAGTAATAGAAAGTGGATCATCTGCTTCTGATGTCTATTCCACATCGAAGCATAATTTTTCCATGCCAGAAGGAGAAATATGTTTGGACAAGTTGTCGATCAAAGAACTTCATGAACTGTTTAAGGTCACTTTTGGTCGGGAAACTACAGTGAAAGATAAACAGTGGCTGAAGAGGAGGATTGCCATGAGTTTAACTAACTCATGCGATGTTTCCGCAACAACATTTACTGTTAAAGATAACAAAATAACTAGAAAATGTGAAGAAGAATGTTCTGGAAATGCGAGTGCTGCAGCTGTAATCTCTGTCAAAAATATGGCTGGAGAGGGTTGTGGAATTGAGGATAACCAGGTTGCTTCTGAAACCAGACTGAAGAATCTTAATGTGGAAAATGAATTGAGAGATGAGGATCAGCAGAGGGAAGAGAGAGCTGCGAAAAGAATACGTAAGCCCACTAAGAGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGAACACATTCCTAGGTCGTCAAGTTCTAATAAAAACATCGGACATGGACATGTTTCTCCAACAGCTTACGTCGAGCCTGCTAGGAGTGCTTTTCCAGAGGCAAGAATGTTTATCACCAGGTTTGACTCTCTTGGAGGTTCTGATGTTCAAATTCCTTGTGTTTCTCGGGTCCGAAGAAGTCGTCCAAGGAAAAATATCAAGTCTCTTATGAAATTCCTTCCGACTGGCGTGGGTGAGGCTGCAAAATTGAGCAATGGTTCTGATGCTGATAGTGAGATTCAGGACAAAGTCTCGAAGCCATGTTCCATGCCTGTGAAGATGCATCTGCTGTCCACTACTGAATCTGTAAAAGAGAAGCAGTGTCTGGTAATTGGCACAACTGAACCAAGGCAGGAATTGAGGCCAAAAAGGATAGATCCATCTAGTAATACTTCGGAGGGCGATATAGTTACTGTTCCGACAGCTAAAGGTGGTATGAGGAGGAAACATCATCGAGCATGGACCCTTGTTGAGGTAATGAAGTTGGTTGAAGGTGTGTCGCGGTGTGGACCAGGGAGGTGGTCTGAGATCAAACGGCTCTCCTTTTCTTCGTATTCATATCGTACCTCTGTTGATCTCAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCACAGACACCTGCAGATGAGGGGATGAATTCACGGAAGCATGGTACAGCGCCAATTCCGGAGCCAATTTTAGTCCGCGTAAGAGAGCTGGCAGAGATGAATTCTCAGGCACCTCAAAATTTCAGCTCAAGCAAGTTAACTGCTAGTGGTCCAGGGAGTGTGCATGGAGACAGATTGGGGTACTTGTAG 1947 0.4314 METVVGIEDNDDGKLEDSVVDRSSSAALSSSPKKISNPVVYKLVRVEGDGRLVPATDDEVMEVEDFLEYENSEMRVVADTGQSLECISIERSSSGKLRLECSEGVSQLGTAEADLGKLNAKFQYIEQMLQKVKQEERLRLSSRSPVHSHVKIDSQCSADKFPVVNEKVRSETPYQEAPSIASSLNYSHSNQSGSIDQCSRPSEGVIESGSSASDVYSTSKHNFSMPEGEICLDKLSIKELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFTVKDNKITRKCEEECSGNASAAAVISVKNMAGEGCGIEDNQVASETRLKNLNVENELRDEDQQREERAAKRIRKPTKRYIEELSENESREHIPRSSSSNKNIGHGHVSPTAYVEPARSAFPEARMFITRFDSLGGSDVQIPCVSRVRRSRPRKNIKSLMKFLPTGVGEAAKLSNGSDADSEIQDKVSKPCSMPVKMHLLSTTESVKEKQCLVIGTTEPRQELRPKRIDPSSNTSEGDIVTVPTAKGGMRRKHHRAWTLVEVMKLVEGVSRCGPGRWSEIKRLSFSSYSYRTSVDLKDKWRNLLKASFAQTPADEGMNSRKHGTAPIPEPILVRVRELAEMNSQAPQNFSSSKLTASGPGSVHGDRLGYL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03051 648 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 527 586 IPR017930 -
Car07g03051 648 SUPERFAMILY Homeodomain-like 529 591 IPR009057 -
Car07g03051 648 SMART sant 531 584 IPR001005 -
Car07g03051 648 Gene3D - 522 631 - -
Car07g03051 648 CDD SANT_TRF 533 583 - -
Car07g03051 648 Pfam Myb-like DNA-binding domain 534 582 IPR001005 -
Car07g03051 648 MobiDBLite consensus disorder prediction 622 636 - -
Car07g03051 648 MobiDBLite consensus disorder prediction 1 32 - -
Car07g03051 648 PANTHER TRF-LIKE 3 1 648 - -
Car07g03051 648 MobiDBLite consensus disorder prediction 622 648 - -
Car07g03051 648 MobiDBLite consensus disorder prediction 361 385 - -
Car07g03051 648 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 648 - -
Car07g03051 648 ProSiteProfiles Myb-like domain profile. 535 582 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03051 Car-Chr7 57508811 57515183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03051 535 581 Single Myb Histone (SMH) Gene Family AT1G72740 44.898 2.37e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car07g03051 Myb_DNA-binding 5.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03051 - - mtr:MTR_8g020330 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03051 07 57508811 57515183 Car07g03051 07 57508811 57515183 ECH