Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03038 ATGGTAAGTAACATGGGTAGACGTCCTTGCTGTCCAAAGGAGATTAATAAAGGTGCTTGGTCTAGAGAAGAAGATGATACCCTCTCCAAATATGTTTCTATTCATGGAGAAGGAAAATGGCAAAAGGTTGCTCAAAATGCAGGTTTAAAGCGGTGTGGAAAAAGTTGCAGACAAAGATGGTTAAATTATCTCAAGCCAGGTATAAAGAGAGGTGATATCTCTTCGGATGAAGAAGATATGATTATAAGACTTCACCGTCTTCTTGGTAACAGATGGTCTTTGATAGCGAAGAGACTACCAGGACGAACAGACAATGAAATCAAGAATTATTGGAATACGAATCTGTCAAAGAAGTTAAAGAAACAACCTATatcatcatcatcatcatggccatcatgttctgtttcaattcaacataatcatcaCAAATATGGAAATGAAAAGACCAAACAAATTGTCCATGTAGCACCACAAGCTCCAAGGCCTAGGAGATTGATCAAGGTTGTTGAATACAACAAAATTTTGGAGAATAATAATAGCATTGGAAGTGAGTGTGATCAAGGAAGTACTGAAGAAACTTCTATTGCTGATTTTTTCATCGACATTGATCATCATCATCAAGAAGAGTTGATGGTTGGTGATGATGGTGAGTCAAACTCAAAGATTCAAAAAATGGAAGATCATAAGGTTATAGTTTCAACTAACAGTCATAGTTCATCATCACCTTCTCATCATTGTCATCTTTTATCAGAGAAATTTGATCCTAATCTAGAGACCCTTTTGGATGTGGAACTCAAGAAGATGGCTTCTTTTCTTGGACTTGAAAATTGA 831 0.3418 MVSNMGRRPCCPKEINKGAWSREEDDTLSKYVSIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGDISSDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLKKQPISSSSSWPSCSVSIQHNHHKYGNEKTKQIVHVAPQAPRPRRLIKVVEYNKILENNNSIGSECDQGSTEETSIADFFIDIDHHHQEELMVGDDGESNSKIQKMEDHKVIVSTNSHSSSSPSHHCHLLSEKFDPNLETLLDVELKKMASFLGLEN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03038 276 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Car07g03038 276 PANTHER MYB TRANSCRIPTION FACTOR 5 272 - -
Car07g03038 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 68 IPR017930 -
Car07g03038 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 119 IPR017930 -
Car07g03038 276 CDD SANT 19 64 IPR001005 -
Car07g03038 276 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Car07g03038 276 Gene3D - 11 70 - -
Car07g03038 276 SMART sant 69 117 IPR001005 -
Car07g03038 276 SMART sant 16 66 IPR001005 -
Car07g03038 276 CDD SANT 74 115 IPR001005 -
Car07g03038 276 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Car07g03038 276 Pfam Myb-like DNA-binding domain 71 115 IPR001005 -
Car07g03038 276 Gene3D - 74 152 - -
Car07g03038 276 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 5 272 - -
Car07g03038 276 SUPERFAMILY Homeodomain-like 15 111 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03038 Car-Chr7 57243232 57244890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03038 5 203 MYB Transcription Factor Family AT4G34990 45.000 4.94e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car07g03038 Myb_DNA-binding 2.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03038 K09422 - gmx:100101858 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00363 07 3211889 3213435 Car07g03038 07 57243232 57244890 ECH
Car07g03038 07 57243232 57244890 Car07g03038 07 57243232 57244890 ECH