Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03036 ATGAGTAACTGGTTGGGTTTTTCTCTTACTCCACACTTAAGGATTGATGAAGAATTTGGAAGAGAAAATCAAGAACATGTAGGAGAAGGTGAAGAAAGAGGAACCTATGTTGTTCCTCCTTCTTCTCATCATCATCCTCATCACTTTTCTGTTATGCCTTTGCGTTCTGATGGTTCACTTTGTGTTTCTGATTCCTTTAGACACTCTGTTACACCTCAAGAATGGAGATATGATAATGCAATAACTGGTGGAAATTCAAATGAAGAAGGACCAAAACTTGAAGATTTTTTGGGATGTTACTCAAATTCTTCACTAGCTGAAACAAAAGTCTTTTGTTCACAACATGACCAAAACCAAAATAGTACTAATTCTAAAATCAATGTTAATTCTTGGATGATTCAATCTCAATTTTCTGATGGGAAAAATTGTAATGAGGCAAATGGGTCATGTAATTTTCAATCACTTAACTTGACTATGAGTCCAAGTGTGCAAAATGGGGTTGTTGGTGTTGGTGCAATTTCTAATGTTCAGGTGAATGAAGATCCTAGAAAAAGGTCTTTGTCAAAATCTAATGCTAGAGAACCTGTCCCTCGAAAATCTATTGATACTTTTGGACAGAGAACTTCTCAATACCGTGGTGTTACTAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGCTGCAGAAAAGAAGGGCAAACTAGGAAAGGAAGACAAGGTGGTTATGACAAGGAAGAAAAAGCAGCAAAGGCTTATGACTTAGCTGCACTGAAGTATTGGGGTCCTACAACTCACATAAATTTCCCTTTAAGCACTTATGAAAAGGAACTTGAAGAAATGAAGAACATGACAAGGCAAGAATTTGTGGCCAATTTAAGAAGGAAGAGCAGTGGATTTTCAAGAGGTGCATCTGTGTATAGAGGTGTGACAAGACACCATCAACATGGAAGGTGGCAGGCTAGGATTGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAGCACACAAGAGGAGGCTGCAGAAGCATATGATATTGCAGCAATTAAATTCAGGGGAACAAGTGCTGTGACCAACTTTGACATAAGTAGGTATGATGTGAAGAGAATTTGCTCAAGCTCAACTCTAATTGCCGGAGATCTTGCGAAACGGTCACCTAAAGACTCAGCTCCTGCAGTCATTACCGAGGACTTCAATTCGTGCGGAAGCTCGTCGACACCTTCTCAGCCGCCTCCTATGACAATCACCGATAGCAAACAACATTCCGATGAATTGTCCAACATGGTGTGGAATTCAAACAGCGACGAGCAACATCATAACGAGTGCGGAAACACCAACATCACCGAATCGTCGCTGCAAGGTTCACCTAGCAACAAGAATGAAATGAATCCTCAAAGTCCTAAATGTGCTGTTGGAATTCCTAATGAATTTGGAGTGAGTGGAACAGATTATGGACATGGTTACTTCAACCTTCATGGACCAAAATTTGATGATGGAAACAATGAAAATGATCACATGAACAACAATAGGCTTGGAAATTTGGGTTTGGTTAATCAAGTTCCTATGTTTGCTTTGTGgaatgaatga 1605 0.3969 MSNWLGFSLTPHLRIDEEFGRENQEHVGEGEERGTYVVPPSSHHHPHHFSVMPLRSDGSLCVSDSFRHSVTPQEWRYDNAITGGNSNEEGPKLEDFLGCYSNSSLAETKVFCSQHDQNQNSTNSKINVNSWMIQSQFSDGKNCNEANGSCNFQSLNLTMSPSVQNGVVGVGAISNVQVNEDPRKRSLSKSNAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSTYEKELEEMKNMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKRSPKDSAPAVITEDFNSCGSSSTPSQPPPMTITDSKQHSDELSNMVWNSNSDEQHHNECGNTNITESSLQGSPSNKNEMNPQSPKCAVGIPNEFGVSGTDYGHGYFNLHGPKFDDGNNENDHMNNNRLGNLGLVNQVPMFALWNE 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03036 534 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 4 469 - -
Car07g03036 534 CDD AP2 308 369 IPR001471 GO:0003700|GO:0006355
Car07g03036 534 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 469 - -
Car07g03036 534 ProSiteProfiles AP2/ERF domain profile. 309 367 IPR001471 GO:0003700|GO:0006355
Car07g03036 534 SUPERFAMILY DNA-binding domain 209 275 IPR016177 GO:0003677
Car07g03036 534 SUPERFAMILY DNA-binding domain 308 369 IPR016177 GO:0003677
Car07g03036 534 CDD AP2 209 275 IPR001471 GO:0003700|GO:0006355
Car07g03036 534 Pfam AP2 domain 210 265 IPR001471 GO:0003700|GO:0006355
Car07g03036 534 Pfam AP2 domain 308 359 IPR001471 GO:0003700|GO:0006355
Car07g03036 534 Gene3D AP2/ERF domain 309 369 IPR036955 GO:0003700|GO:0006355
Car07g03036 534 Gene3D AP2/ERF domain 209 275 IPR036955 GO:0003700|GO:0006355
Car07g03036 534 ProSiteProfiles AP2/ERF domain profile. 210 273 IPR001471 GO:0003700|GO:0006355
Car07g03036 534 MobiDBLite consensus disorder prediction 400 480 - -
Car07g03036 534 MobiDBLite consensus disorder prediction 402 471 - -
Car07g03036 534 SMART rav1_2 309 373 IPR001471 GO:0003700|GO:0006355
Car07g03036 534 SMART rav1_2 210 279 IPR001471 GO:0003700|GO:0006355
Car07g03036 534 PRINTS Ethylene responsive element binding protein signature 211 222 IPR001471 GO:0003700|GO:0006355
Car07g03036 534 PRINTS Ethylene responsive element binding protein signature 349 369 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03036 Car-Chr7 57224279 57228582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03036 1 395 AP2-EREBP Transcription Factor Family AT1G72570 52.732 5.75e-132 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Car07g03036 AP2 1.6e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03036 K09285 - gmx:100805489 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03036 07 57224279 57228582 Car07g03036 07 57224279 57228582 ECH