Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03034 ATGATGAGTGCAAGTTCAAGAAACAGGTCCCCTTTCACACCAAATCAATGGCAAGAACTTGAGCAACAAGCACTTGTTTTCAAATACATGGTTACTGGAACACCTATTCCATCAGATCTCATTTTCTCCATTAAAAGAAGCCTAGACACTTCAATTTCTTCAAGAATTTTCCCTCATCACCCAATTGGGTGGGGATGTTTTGAAATGGGGTTTGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGAAAGAAATGGAGATGTTCAAAGGAAGCATATCCAGATTCTAAGTACTGTGAAAGACACATGCACAGAGGTAGAAACCGTTCAAGAAAGCCTGTGGAACCTGTTTCTTCTTCTTcaacaacaacaacaacaacaataacCTCTCAAACTCAAAATCAAAATCAAACAAACACACTTCTACCTTCTTATAATAACAGAAACCTTTCCTTGAACAACAATAATACTAGTGCTTTAACTTCACCTTCTTGTTCTTTTCCTTTTTCTCCATTGTCTTCATCTTCAAATATTGGTATTGACTCACAACCCTTTTCACAATCTTACCAAAACCCCTACTTTTACTCTCAATCAACCTCTTCTAGACCTCTTGATTCTGATTTTCAAACTCAACAAGATTCCACTACTCATCACCTGTTTTTGGACTCTGGATCTTATTCTCATGATGAAAAGGACTATAGGAGGCATGTTCAAGGAATAAGAGAGGGTGTGGATGAGAGAGTTTTCTTTCCAGAAACTTCAGGGTCATCTAGAAGCTATCATGATTCATATCAACAACTATCAGTGAATTCCTTTAAGTCTTATTCAACCTCACAGTTTCAGaacatcaatgataataaccaaagacagcaagaacaacaacaacaacaCTGTTTTGTTTTAGGTACTGATTTCAAATCAACAAGACCAAGCAACAAGGACAAAGAAAGTGAAACAACTCAGAAACCACTTCATCATTTCTTTGGTGAGTGGACACCAAAGAACACAGATTCTTGGCTTGATCTTGCTTCCAACTCTAGAATCCCATCAGGTTAA 1068 0.3567 MMSASSRNRSPFTPNQWQELEQQALVFKYMVTGTPIPSDLIFSIKRSLDTSISSRIFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEPVSSSSTTTTTTITSQTQNQNQTNTLLPSYNNRNLSLNNNNTSALTSPSCSFPFSPLSSSSNIGIDSQPFSQSYQNPYFYSQSTSSRPLDSDFQTQQDSTTHHLFLDSGSYSHDEKDYRRHVQGIREGVDERVFFPETSGSSRSYHDSYQQLSVNSFKSYSTSQFQNINDNNQRQQEQQQQHCFVLGTDFKSTRPSNKDKESETTQKPLHHFFGEWTPKNTDSWLDLASNSRIPSG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03034 355 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Car07g03034 355 PANTHER - 1 354 IPR031137 GO:0005634|GO:0006351|GO:0032502
Car07g03034 355 MobiDBLite consensus disorder prediction 117 161 - -
Car07g03034 355 MobiDBLite consensus disorder prediction 312 327 - -
Car07g03034 355 MobiDBLite consensus disorder prediction 308 355 - -
Car07g03034 355 MobiDBLite consensus disorder prediction 103 161 - -
Car07g03034 355 MobiDBLite consensus disorder prediction 193 213 - -
Car07g03034 355 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car07g03034 355 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car07g03034 355 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 1 354 - -
Car07g03034 355 Pfam WRC 77 119 IPR014977 -
Car07g03034 355 MobiDBLite consensus disorder prediction 341 355 - -
Car07g03034 355 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03034 Car-Chr7 57176902 57179758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03034 3 334 GRF Transcription Factor Family AT3G13960 42.063 6.51e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Car07g03034 WRC 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03034 - - vun:114166369 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03034 07 57176902 57179758 Car07g03034 07 57176902 57179758 ECH