Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03030 ATGAGCTTTCTTATGTCGATTCTAGAGCACAATTTCCTTTATGACCAATTTTCCTTTGTGTTTGTTATCCAgtttcgtcgtctcaggtccattttgaatGCTCAGGTAGGGTTGTTTTTTGGACAAGAGGTTGGGAATCTTTCAAGCTATGCTCCTTCTGGGGTTCTCGCAGAAAATACCACTAGTTCTCTCTTTGTTAAGGGGGTTGCTCGAAATGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGCCATTACATGTTTGCTGTTGGAGAAAATATAACTTCCCGCTATAAGATCCACAACAAAATGGGTGAAGGAACTTTTGGGCAGCTTGGTAAACATGACATTGGAGGCAACCATTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCAAATCTATATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTAGCAGACAACTATTGGAATGTATAGCATTTATGCATGATTTGCGCATGATCCATACTGACCTTAAGCCTGAAAACATACTCCTCGTTTCATCAGATTATGTCAAAGTTCCTGACTACAAGGTTGAGCAATTGGAGCAGGAGGTATCTGTGTTACAACAAGTAGTATTGAGATTGAAGTGGCAATTGGAGTTGATAGAGACTCATCAACATGAGGTAGTTGCAGAACTTTTTCACCTCTGGTCTAAGCTTCTTTTTAATCCATTTTAG 765 0.3843 MSFLMSILEHNFLYDQFSFVFVIQFRRLRSILNAQVGLFFGQEVGNLSSYAPSGVLAENTTSSLFVKGVARNGSPPWRDDDKDGHYMFAVGENITSRYKIHNKMGEGTFGQLGKHDIGGNHCVQIRNWFDYRNQIYIVFEKLGPSLYDFLRKNNYRSFPIDLVREISRQLLECIAFMHDLRMIHTDLKPENILLVSSDYVKVPDYKVEQLEQEVSVLQQVVLRLKWQLELIETHQHEVVAELFHLWSKLLFNPF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03030 254 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 32 111 - -
Car07g03030 254 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 111 220 - -
Car07g03030 254 Coils Coil 207 227 - -
Car07g03030 254 Pfam Protein kinase domain 120 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03030 254 Gene3D Phosphorylase Kinase; domain 1 72 113 - -
Car07g03030 254 PANTHER SERINE/THREONINE-PROTEIN KINASE AFC2 32 111 - -
Car07g03030 254 PANTHER SERINE/THREONINE-PROTEIN KINASE AFC2 111 220 - -
Car07g03030 254 Gene3D Transferase(Phosphotransferase) domain 1 115 211 - -
Car07g03030 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Car07g03030 254 ProSiteProfiles Protein kinase domain profile. 25 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03030 254 Gene3D Phosphorylase Kinase; domain 1 123 141 - -
Car07g03030 254 SMART serkin_6 98 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03030 254 SUPERFAMILY Protein kinase-like (PK-like) 85 205 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03030 Car-Chr7 57120261 57125881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03030 135 197 EF-hand Containing Proteins AT5G22840 42.188 1.14e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Car07g03030 Pkinase 6.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03030 K08287 - gmx:100804452 301.597