Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03025 ATGACCATGGAACCAAACCCAACATCAGATCACATTCTTGACTGGCTTGAAGGTTCTGTCTCTTTCTTTCCATCATTCTTGGATGATCCATATAACAATGGTTACATCCAAGAGTATCAGTTGTGGGATCAGAACCAAGAAATTAGCAACCAGTGTCAAACTGATACCAATACTGATTCAACTAATGCCACAAACAGCACCACCAATATTGTTGCTGCTAGTACTACCACAAGCACAACATCCCTTGAGCCTAATAGTTCCAATAACATACCCTTTTCTGATTTGCCGAAGAAAAGAAATGCCACCGATGAATCGAGTCTCAAGAAACAATCACAAAACCAAAAGAACAAGAGAATCAAGAGTCGTTCGATGAATGAAGCTGATAATGGAGATGCAGCTCTTGAAGGGACAGTGGTTAGAAAACCAGGTGGAAACAAGAAGAGTGCAGCTAAGGCCAATGGAAGTAACTGTAACAGTGGAAATAACAAGGATGGTAGGTGGGCTGAGCAGTTGCTCAATCCTTGTGCTGCAGCCATAGCCGGTGGAAATCTGAATCGTGTGCAACATCTCTTATATGTTCTCCATGAGCTGGCCTCAACTACTGGTGATGCCAACCACCGGCTCGCAGCGCATGGTCTCCGAGCACTGACACACCATCTATCTTCCTCTTCATCGTCTACCTCATCAGGGGCTATAACTTTTGCATCTACAGAACCACGATTCTTTCAAAAGTCGTTACTGAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTTCCTAATAACATAGCAAATGCTTCCATCCTTCAAGTTCTAGCTGAAGAGCCAAACAACTCACGGACGATTCACATCCTTGACATTGGAGTCTCTCATGGTGTTCAATGGCCAACTTTTCTAGAGGCCTTGAGTCGTCGACCTGGTGGACCTCCTCCTCTTGTTCGCCTCACTGTTGTTACTGCTTCTTCGTCAGCTGAAAATGACCAAAATATGGAGACCCCGTTCTCGATAGGTCCATGTGGTGATAACTTCTCTACTAGACTCCTTGGTTATGCACAGTCCATAAATGTCAATCTGCAGATAAACAAGCTTGATAATCATCCACTGCAGACATTAAATGCTAAAATTGTTGACACCTCCCCGGATGAAACCTTTATTGTATGTGCTCAGTTCAGGCTGCACCACTTGAATCATCACACTCCTGACGAAAGAAGCGAGTTTCTGAAGGTGTTGAGGGACATGGAGCCTAAAGGGGTGATATTAAGTGAGAACAACTTGGAGTGTTGCTGCAGTAGTTGTGGCGATTTTGCCACTGGATTCTCTCGAAGAGTGGAGTACTTATGGAGGTTTTTAGATTCAACCAGTTCGGCGTTCAAAGGTCGTGAGAATGATGAAAGGAGAATGATGGAAGGTGAGGCTGCAAAAGCATTGACAAACCAGCGCGAGATGAATGAAGGCAGAGAAAAATGGTGTGAAAGAATGAAAGAAGCAGGGTTTGCAGGGGAAATATTTGGCGAGGATGCAATTGACGGAGGTCGAGCTTTGCTAAGGAAGTATGATAGTAATTGGGAGATGAAAGTAGAAGAGAAGAATACAAGTGTGGGAATATGGTGGAAGGGGCAACCTGTTTCTTTCTGTTCTTTGTGGAAACTGAATAAACAACTAGAATAG 1665 0.4384 MTMEPNPTSDHILDWLEGSVSFFPSFLDDPYNNGYIQEYQLWDQNQEISNQCQTDTNTDSTNATNSTTNIVAASTTTSTTSLEPNSSNNIPFSDLPKKRNATDESSLKKQSQNQKNKRIKSRSMNEADNGDAALEGTVVRKPGGNKKSAAKANGSNCNSGNNKDGRWAEQLLNPCAAAIAGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTHHLSSSSSSTSSGAITFASTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEEPNNSRTIHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVTASSSAENDQNMETPFSIGPCGDNFSTRLLGYAQSINVNLQINKLDNHPLQTLNAKIVDTSPDETFIVCAQFRLHHLNHHTPDERSEFLKVLRDMEPKGVILSENNLECCCSSCGDFATGFSRRVEYLWRFLDSTSSAFKGRENDERRMMEGEAAKALTNQREMNEGREKWCERMKEAGFAGEIFGEDAIDGGRALLRKYDSNWEMKVEEKNTSVGIWWKGQPVSFCSLWKLNKQLE 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03025 554 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 548 IPR005202 -
Car07g03025 554 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 548 IPR030015 -
Car07g03025 554 MobiDBLite consensus disorder prediction 75 95 - -
Car07g03025 554 Pfam GRAS domain family 169 548 IPR005202 -
Car07g03025 554 ProSiteProfiles GRAS family profile. 159 548 IPR005202 -
Car07g03025 554 MobiDBLite consensus disorder prediction 75 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03025 Car-Chr7 57089973 57092067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03025 2 548 GRAS Transcription Factor Family AT3G13840 50.000 5.14e-177 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car07g03025 GRAS 2.4e-74 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03025 - - gmx:100806550 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03025 07 57089973 57092067 Car07g03025 07 57089973 57092067 ECH
Car07g03025 07 57089973 57092067 Car01g02671 01 52210807 52212469 PCT