Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03021 ATGCCTTCAAAGAAAGCTCAATGGAAAACCTTTGTATTTGGTTGTTTCAAAGACAACAAACAACAACCTTCATTGGAAACACCAAAAATGGTTTCAAAAAAGACATGCTCAAGTAGAATTTCACTTTCTGATTTAAGTGATTATTCATCGGTTTCTGTCATGAGTGATTTGTCCAATTCTTTAGTAGGATCAAATCTTTATATTTTCACTTGCAAGGAACTCAAAGAGATCACAAACAATTTCAACAAATCAAATTTTCTTGGTGAAGGTGGATTTGGCAAAGTTTACAAAGGTTTTATTGATGATAAGTTTAGGCCTGCACTTCTTCCTCAAGTTGTAGCTGTTAAGGCCTTAAACTTGGATGGAAAACAAGGTCATAGAGAGTGGTTGGCTGAAGTTATCTTTTTGGGGCAATTGAAGCATAGAAATTTGGTTAATTTAATTGGCTATTGTTGTGAAGATGAACATAGACTTCTTGTGTACGAATACATGGAGAGGGGAAATCTAGAGGAAAAACTTTTCAAAGCTTATTTAGCAACCTTGCCTTGGTTAACAAGAATCAAAATTGCAATTGGAGCTGCAAAAGGACTAGCTTTTCTTCATGAAGAAGAGAAACCAGTTATTTATAGAGATATTAAAGCCTCAAACATTCTATTAGATGCTGATTACAATGCTAAGCTTTCAGATTTTGGTTTGGCAATTGATGGACCAGAAAAAGATCAAACACATATTACAACTCGTGTGATGGGTACACATGGTTATGCTGCTCCTGAATATATCATGACAGGTCGTTTGACAACCATGAGTGATGTATATAGCTTTGGAGTTGTTCTTTTAGAGCTAATAACTGGGAAAAAATCTGTGGACAAAAAAAGACCAACAAGAGAACAAGATTTGGTAGAATGGGCAAGGCCATTATTGAAGGATTCACACAAACTTGAAAGAATAATTGACTCAAGACTAGAGGATCAATACTCAATTGAAGGAGCTAGAAAATTAGCAACCTTGGCTTATCAATGTCTAAGCCAACATGACAAAAGTAGGCCAACAATGAGAACCGTTGTTAAAACCTTAGAGCCACTCATGAAATTAAATGACATTCCAATTGGTCATTTTGTTTATGTGGCTCCTAGTGAGGTAACAAATGTTGAAGTGTCACTAAATGTGAATAAAAAAGAAAATGAGATGTGTGATGTGGACAACAAAAGTGTGGTGAAAACAATAGATGAAGAAAAGGGTTATCAAATTCGTCGAAAAAGTCGTAGCAATCGACGACGGATTAAGCCGTTGACGAAACCTCGTGATGTATACTCTGATACATCTTTGTATAAGACTCTTGGAACTAATTTATATTCACCTAAGCAAAACAAGTAG 1374 0.3537 MPSKKAQWKTFVFGCFKDNKQQPSLETPKMVSKKTCSSRISLSDLSDYSSVSVMSDLSNSLVGSNLYIFTCKELKEITNNFNKSNFLGEGGFGKVYKGFIDDKFRPALLPQVVAVKALNLDGKQGHREWLAEVIFLGQLKHRNLVNLIGYCCEDEHRLLVYEYMERGNLEEKLFKAYLATLPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDIKASNILLDADYNAKLSDFGLAIDGPEKDQTHITTRVMGTHGYAAPEYIMTGRLTTMSDVYSFGVVLLELITGKKSVDKKRPTREQDLVEWARPLLKDSHKLERIIDSRLEDQYSIEGARKLATLAYQCLSQHDKSRPTMRTVVKTLEPLMKLNDIPIGHFVYVAPSEVTNVEVSLNVNKKENEMCDVDNKSVVKTIDEEKGYQIRRKSRSNRRRIKPLTKPRDVYSDTSLYKTLGTNLYSPKQNK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03021 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Car07g03021 457 Gene3D Phosphorylase Kinase; domain 1 41 163 - -
Car07g03021 457 SMART serkin_6 81 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03021 457 ProSitePatterns Protein kinases ATP-binding region signature. 87 116 IPR017441 GO:0005524
Car07g03021 457 Gene3D Transferase(Phosphotransferase) domain 1 164 368 - -
Car07g03021 457 CDD STKc_IRAK 87 361 - -
Car07g03021 457 PANTHER BNAA02G16030D PROTEIN 29 414 - -
Car07g03021 457 Pfam Protein tyrosine and serine/threonine kinase 84 358 IPR001245 GO:0004672|GO:0006468
Car07g03021 457 SUPERFAMILY Protein kinase-like (PK-like) 56 359 IPR011009 -
Car07g03021 457 PANTHER OS01G0588500 PROTEIN-RELATED 29 414 - -
Car07g03021 457 ProSiteProfiles Protein kinase domain profile. 81 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03021 Car-Chr7 57042093 57044862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03021 69 399 Glycoside Hydrolase AT3G07070 46.884 1.77e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car07g03021 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03021 - - gmx:100790454 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03021 07 57042093 57044862 Car01g01253 01 15594614 15599018 ECH
Car07g00375 07 3292554 3294629 Car07g03021 07 57042093 57044862 ECH
Car01g01253 01 15594614 15599018 Car07g03021 07 57042093 57044862 ECH
Car07g03021 07 57042093 57044862 Car07g03021 07 57042093 57044862 ECH
Car07g03021 07 57042093 57044862 Car05g02877 05 73726537 73728904 ECH
Car07g03021 07 57042093 57044862 Car04g03263 04 61073437 61076764 ECH