Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03005 ATGTCTTCAGCGGAGGAAAACATACCCTTAGAATTAGAAACTGCCCAAAAAATAATCCTCCGATGGGACTCCACAGCATCAGAAGAAGCACGCGAAAAAATGATCTTCGAAACCAATAACCGTCAAGAAGTCGATCTTTACCTCTCAGCCGTCGATGAAATCCAACGCTCCATATCTTCCACCTCCCTCGACCACCCTTCCAAACCCACCATTCAGATCGCCATGGCTCGTTTAGAAGACGAATTTCGTAACATCCTCATCTCTCACACCAACCCCATCATCCACGACGACGACCctccttcttcttcttcttcctctttctcttcAATTTCCTCAACACGAAAACACGATGAAGACgaaccagaaccagaaccagaaccagaaGAACAAGAACAACAAGATAATCTTAACGAAAACAGCGTTAAGTTTCTTCGTTACGACAGTACTTGTTCTGTTGCTACTACAGCAACTATGAATTCTTCAAGCTACCGTTCAACTAGTAGCATCCGTGAGATCGATCTCATACCTTCCGAAGCGGTTTCCGATCTCCGCTGTATCGCCGATAGAATGATTTCCTCCGGTTACCTTCGTGAATGCATCCAAGTTTATGGAAGTGTGAGAAAATCAGCTGTAGATTCGAGTTTCAAGAAACTCGGCGTCGAGAAACTTAGCATCGGCGATGTTCAGAGATTGGATTGGGAACAGCTTGAAACGAAGATCAGACGATGGATTCGAGCTGCTAAGGTTTGTGTTAGAACGCTTTTTGCTAGTGAGAAGAAATTATGTGAACAAATCTTTGATGGAATTGGTACTTCTATTGATGATGCTTGTTTTATGGAAACTGTTAAAGGTCCTGCTATTCAGCTTTTCAATTTTGCTGAAGCTATTAGTATTAGTCGTAGGTCGCCCGAGAAATTGTTTAAGATTCTTGACCTTCATGATGCTTTAATGGATTTGATACCTGATATTGATGTTGTTTTTGATTCTAAGTCTTCTGAGTCCATTCGGGTACAAGCAGCCGAGATTTTGTCGCGTTTGGCTGAGGCTGCTAGAGGGATTTTATCTGAGTTTGAAAATGCTGTTCTTAAAGAACCTTCTAAGGTTCCTGTTCCTGGTGGAACTATTCATCCTTTGACTAGATGTTCGGGCGATCCTTCCACTCCTGATATGGATTTCGATGAGCTGGAAGGGAAACAACCTTTGGCTATTCATTTGATTTGGATTATTGTTATATTGCAATTCAATTTAGATGGTAAGTCTAAGCATTATAAAGATGCTTCTTTGTGTCATTTGTTTATAATGAACAATGTGCACTATATTGTTCAGAAGGTTAGAGGGTCACCTGAATTGAGGGAATTGATTGAGGATGATTATTTGAAGAAGTTGACTGGGAAGTTTCGACAGGCTGCTACGAGCTATCAGAGGGCTACTTGGGTTAGGGTTTTGTATTGTTTGAGGGATGAAGGGTTGCATGTGAGCGGCGGATTTTCTTCTGGGGTGTCGAAGAGTGCTTTGAGGGAAAGGTTTAAAGCTTTCAATGCTATGTTTGAAGAGGTACATAGGACTCAAGCTGTTTGGTTGATACCGGATTCGCAGCTTAGGGAGGAGCTTCGGATATCTATTTCCGAGAAGCTGATTCCAGCGTATAGATCGTTCCTTGGGCGGTTCAGGAGCCATATAGAGAGCGGAAGACATCCGGAGAATTACATTAAGTATTCGGTTGAAGACCTTGAGGATGCTGTTTTGGATTTTTTCGAAGGGATTCCTGTTTCGCAGCACATGAGAAGGAGATCTGAGTGA 1800 0.4106 MSSAEENIPLELETAQKIILRWDSTASEEAREKMIFETNNRQEVDLYLSAVDEIQRSISSTSLDHPSKPTIQIAMARLEDEFRNILISHTNPIIHDDDPPSSSSSSFSSISSTRKHDEDEPEPEPEPEEQEQQDNLNENSVKFLRYDSTCSVATTATMNSSSYRSTSSIREIDLIPSEAVSDLRCIADRMISSGYLRECIQVYGSVRKSAVDSSFKKLGVEKLSIGDVQRLDWEQLETKIRRWIRAAKVCVRTLFASEKKLCEQIFDGIGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDVVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLKEPSKVPVPGGTIHPLTRCSGDPSTPDMDFDELEGKQPLAIHLIWIIVILQFNLDGKSKHYKDASLCHLFIMNNVHYIVQKVRGSPELRELIEDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHMRRRSE 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03005 599 Pfam Exo70 exocyst complex subunit 393 581 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car07g03005 599 Pfam Exo70 exocyst complex subunit 242 380 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car07g03005 599 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 380 - -
Car07g03005 599 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 380 IPR004140 GO:0000145|GO:0006887
Car07g03005 599 SUPERFAMILY Cullin repeat-like 29 586 IPR016159 -
Car07g03005 599 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 382 598 - -
Car07g03005 599 MobiDBLite consensus disorder prediction 91 135 - -
Car07g03005 599 Gene3D Exocyst complex component Exo70 126 595 - -
Car07g03005 599 Gene3D Exocyst complex component Exo70 18 119 - -
Car07g03005 599 MobiDBLite consensus disorder prediction 95 111 - -
Car07g03005 599 PANTHER EXOCYST COMPLEX PROTEIN EXO70 382 598 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03005 Car-Chr7 56768857 56770743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03005 12 599 EXO70 exocyst subunit family AT1G72470 67.851 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03005 K07195 - gmx:100808671 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03005 07 56768857 56770743 Car07g03005 07 56768857 56770743 ECH