Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03004 ATGATATGTTCCATTTCAGAATCAGAAGCATTGTTAAGTCTAAAAAACTCACTCTCCAATGCTGATGCTCTTGATAATTGGATTGCCAGCACTTTGCCTTGTAGTGAAGATGATCAATGGGAAGGTGTTGTTTGTTACAACGGTTTCGTAACCGGCCTACGCCTCGTTGGAATGGGACTACTCGGAAAAATCGATGTCGATGCATTGCTCGAACTCAAAGCTCTAAGAACAATTAGTTTCGTCAACAATTCATTCTCCGGTTCGATTCCTGAACTGAATCGAATCGGTTTCTTAAAAGCCATGTATCTGTCTGGAAACAATTTTTCCGGACACATTCCTAAGGAATATTTCATGAGAATGAAATCACTGAAAAAAGTTTGGCTATCAAACAATCAATTCACAGGTGATATTCCATCATCATTATCTGAAGTTCCTAATCTTATTGAATTACATCTTGAAAACAATCAATTTAGTGGTAACATTCCAAATCTTAACAATCCTGCATTGGTGAAACTTAATGTTTCAAACAACAAATTAGAAGGTGAAGTTCCTGAAAGTTTGTTGAGATTCAATGAGAGTTCTTTTGCAGGGAATTCTGGTTTATGTGGTGAGAAATTTGGTTCAACATGTGGAAAACCAATGATGCAAACAAATCCTATTACTGATGATCATAATGTTTCACAATTAAACACCAATATTCAGGGTAATGTTTATGTGACAGATAAGACTGAAAAGAAGAGTAAAGCACTTCAAATTCTTGGTATTGTTGTGACAAGTTTAGTACTTATTTCACTTGCAATATTTTTGATTATTAAATCAAGAAAAAATAAGAAGGAGAAAGATGATTCATTTGGTGAGAAACATGGACAAGAAATTAGTAATAACAATGATGGTGGTTTTGAAGTTCAAGTtagtagtagtaatagtattagtagtaacagtagtagtagtagtGGGAAAAGAGATGCGGCATTGATAAAAAAAACACCATCTAGTAGAAGAAGTTCTTCTAATGGAGGTGGAAAAGGAATAGGGGAGCTTGTAATGATGAATGAAGAAAAGGGTGTGTTTGGTTTATCAGATTTGATGAAAGCAAGTGCTGAAGTGCTTGGAAATGGAGGAAAAGATGAGAAACTTGTGATCTCTGAGTATGTTCCAAGAGGAAGTCTATTGTTTTTGTTGCATGGTGACAGAGGAGCATCACATTCAGAACTAGATTGGCAGACACGTTTAAAAATTGTACAAGGAATTGCAAAAGGAATGAAATATCTTCACACAGAATTATCATCCTCAGATTTACCACATGGAAACCTGAAATCAAGCAATGTTCTACTAGGACCAGATTATGAACCATTATTAATAGACTATGGTTTTATCCACATGGTTAATCCTTCAAGTTTTTCACACACATTATTTGCATACAAAGTACCAGAAGCATCACAACATAACCAAATATCGCCTCGTTGCGACGTGTACTGTTTCGGCGTCATAATTCTGGAAATACTAACAGGAAAATTTCCTTCTCAATATCTTATCAATGGTAAAGGTGGAACTGATGTGGTACAATGGGTAGCATCAGCAATTTGTGAAGGAAGAGAAGTTGAATTACTTGATCCTGAAATTTCAAGTGATAGAAATTCATTAAGTGAAATGGAAAAACTTATTCATATTGGTGCTGCTTGCACTGAAAGTAATGTTTCAATGAGATTAGATATGATGGAAGCTGTTAGAAGGATAGAAGAGATtaaaataaatggtaattctaataatattaataataatGTTCAAGAATCAAGGACTATAGAGGTTTTACCTTCACTTAGAGATGGTTATGCAGATTCTCAAGAACAACATCATGGTGATGAATCAAGGAGGAGACATGGAACAAATAGTTTTGGAAGTAAAGAATATTTTGAATTTGGAATTTCCTAA 1932 0.3375 MICSISESEALLSLKNSLSNADALDNWIASTLPCSEDDQWEGVVCYNGFVTGLRLVGMGLLGKIDVDALLELKALRTISFVNNSFSGSIPELNRIGFLKAMYLSGNNFSGHIPKEYFMRMKSLKKVWLSNNQFTGDIPSSLSEVPNLIELHLENNQFSGNIPNLNNPALVKLNVSNNKLEGEVPESLLRFNESSFAGNSGLCGEKFGSTCGKPMMQTNPITDDHNVSQLNTNIQGNVYVTDKTEKKSKALQILGIVVTSLVLISLAIFLIIKSRKNKKEKDDSFGEKHGQEISNNNDGGFEVQVSSSNSISSNSSSSSGKRDAALIKKTPSSRRSSSNGGGKGIGELVMMNEEKGVFGLSDLMKASAEVLGNGGKDEKLVISEYVPRGSLLFLLHGDRGASHSELDWQTRLKIVQGIAKGMKYLHTELSSSDLPHGNLKSSNVLLGPDYEPLLIDYGFIHMVNPSSFSHTLFAYKVPEASQHNQISPRCDVYCFGVIILEILTGKFPSQYLINGKGGTDVVQWVASAICEGREVELLDPEISSDRNSLSEMEKLIHIGAACTESNVSMRLDMMEAVRRIEEIKINGNSNNINNNVQESRTIEVLPSLRDGYADSQEQHHGDESRRRHGTNSFGSKEYFEFGIS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03004 643 MobiDBLite consensus disorder prediction 289 322 - -
Car07g03004 643 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 2 374 - -
Car07g03004 643 SUPERFAMILY L domain-like 3 189 - -
Car07g03004 643 Gene3D Ribonuclease Inhibitor 169 204 IPR032675 -
Car07g03004 643 SUPERFAMILY Protein kinase-like (PK-like) 376 580 IPR011009 -
Car07g03004 643 MobiDBLite consensus disorder prediction 279 345 - -
Car07g03004 643 Gene3D Ribonuclease Inhibitor 5 165 IPR032675 -
Car07g03004 643 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 375 588 - -
Car07g03004 643 Pfam Protein kinase domain 368 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03004 643 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 375 588 - -
Car07g03004 643 Pfam Leucine rich repeat N-terminal domain 6 45 IPR013210 -
Car07g03004 643 Gene3D Transferase(Phosphotransferase) domain 1 385 604 - -
Car07g03004 643 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 374 - -
Car07g03004 643 ProSiteProfiles Protein kinase domain profile. 289 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g03004 643 MobiDBLite consensus disorder prediction 612 632 - -
Car07g03004 643 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03004 Car-Chr7 56753061 56755422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03004 5 584 Receptor kinase-like Gene Family AT3G42880 39.002 1.22e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car07g03004 Pkinase 5.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03004 - - lang:109337801 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03004 07 56753061 56755422 Car07g03004 07 56753061 56755422 ECH