Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03001 ATGTCAACTTTCCCTAATACGGTTTCCGATAGCCAGAGGTCCGGCAaggcaccggagaagttcaaattttcacagacttgtagtcttttgagtcaattcttgaaggaaaAAAGAATTTCTGGTGATTCTACTCCTGGATTATTTGGGAAAATTAAGCCTAAAGCAAGTACAAAGGATTTGTTAGGCAACAAGCAAAACTCAGATGGAGGTTTGAGACTAAATGCTTCTGCTATGGATTCTCTTCCCCAGCTTGTGGAAAACCCCTGCATTAAGAAGTCTAATATAAGATCAACAAATTCTGAAACTCCTCAATTGACAATATTCTACGCCGGAAAAATGTTAGTATTTGACGCTTTTCGGCCGGAGAAAGCGACGGAAATCATGGAATTGGCCACCAAATTAGCCTCTGAAAATTCAAGCAGGGAGGAAAATCCAACAAGTGCACCTATCACTAGTGAAAAATTAAAGGATTCCAAAGTTCCTCAACCAAAGACTGCCTTAGAAACCCCTAGAGAAAACCAAGTCATTGGTTCTGATATGAGATATCCAAGAAGAGCTTCACTTCTTAAATTCCTTGAGAAAAGAAAAGAAAGGGTCATTAGTAGAGGACCATACCAAATTAACAACCACAAAATTGAGGGTAGTAGTTCAGGAGGGGAACCAAAAGAGCAGTGTTCCAAACACTTTGACCTTAACATATAA 702 0.3604 MSTFPNTVSDSQRSGKAPEKFKFSQTCSLLSQFLKEKRISGDSTPGLFGKIKPKASTKDLLGNKQNSDGGLRLNASAMDSLPQLVENPCIKKSNIRSTNSETPQLTIFYAGKMLVFDAFRPEKATEIMELATKLASENSSREENPTSAPITSEKLKDSKVPQPKTALETPRENQVIGSDMRYPRRASLLKFLEKRKERVISRGPYQINNHKIEGSSSGGEPKEQCSKHFDLNI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03001 233 MobiDBLite consensus disorder prediction 208 222 - -
Car07g03001 233 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 8 226 - -
Car07g03001 233 MobiDBLite consensus disorder prediction 1 21 - -
Car07g03001 233 MobiDBLite consensus disorder prediction 135 153 - -
Car07g03001 233 SMART tify_2 98 133 IPR010399 -
Car07g03001 233 MobiDBLite consensus disorder prediction 202 233 - -
Car07g03001 233 Pfam tify domain 100 131 IPR010399 -
Car07g03001 233 MobiDBLite consensus disorder prediction 135 179 - -
Car07g03001 233 ProSiteProfiles Tify domain profile. 98 133 IPR010399 -
Car07g03001 233 Pfam Jas motif 184 206 IPR018467 -
Car07g03001 233 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 8 226 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03001 Car-Chr7 56732939 56736062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03001 14 207 Tify Gene Family AT1G19180 34.685 6.94e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Car07g03001 tify 2.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03001 K13464 - gmx:100778559 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03001 07 56732939 56736062 Car07g03001 07 56732939 56736062 ECH