Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02994 ATGGCAACCAACGATTCAACGATGGAGTTTCACGAAATCAGCAGCGAAACTGAAGAAGGATCCAACCTCAGTTCAGAATATGACGACGATTCAGAACAAGATCCTGATTACGACATGCTCGAAGAAACCCATCGTAGCTTCTCCAATCTCTCACTCAGAAACAAGGCAAAAAAGCGCATAGTTGAAGATAAGGGTCTGGCTACTACTGAGATAAACTCAGAAGGGATAGAGATTACTGCATCATCTCTAGATGATGAAAATTCTGAAACAGTTCAGAAAATAATAAAGGCGGGTCTGCTAGAGAAGTTGAAAGTGGATGAATGCAAGATGTATTTGAAGAAGAATGGTCTGAGGCTAACAGGGAATAAGGACACACTTATCCAGCGTATAAAGGAGCATCTAGAGATTATAAATGGTGGAGGGGAGAAAAAGTACCCACCTCAGAGCTTTGTGTTGAATTGTAAAGGTGATGCATGCACTGGTGATGTTGTTTTGTTTGAGCAAAATGTTTATGAAATGTTCAACATAGCATCCAGGAGTGCGAGCGGTCCACCGTGCGGCAAAAGGATTGTTGCAGGCCGCATAGTGAAAGAAAGCTATGGTGCTGCTAAACAACAGCATACATTTACGATTGAAGTGCTATGGAGCAAGGGAGAAAAGCCTCTCCCTCCCCTTCACCCCCTACTGATTAAGGGTCGAAACCTTTATAGGTTGAAGACTTTGAGACAGAAATGGGAGGATGAAGGGAAAAGGCAGAAAATGTTAATGGAAAAACACTCTAGGGGAGACGTTGCTAGGGCAGATAGGGAAGCAAGAATACAAGAAAAGGAGAGGAGAAAAACCATGAAGGAAAATAGGATCTCCAAAAAGGATTCAGCAAAGAACCAATCCCAATCACATTCATGCATTGCTGCAACAAGGTCACAAAAGCAACCTCAAGAAACAACAAAAGCATTCATTAATCTAGAAAAGCCACAATTTCCATCTCAACACTCAGTTTCATCTGCGAATACAAGCATAGCAACACCTGCAATTGTAAATAAACCAGCAGCTGTAACTGAACAGCGCAGCCGACCTATTGATTCTCGAACTGTTGCAATGGGATCCGACCAGTTCAGAAATTCAGGACAATCATCTTTTAATGCAAACTACTATAGTACTGACTACCATTGCAGAGACAAACCAACTACTTTTGTTAAGACAAACAATTTTACAGAGAGAAGCTATCAAAGGAAGCCTTTGGCAAGTACGAATCAATTGCATTCGCATGTTGCAAATGCGGATCACGTGCATATGTCGATCCCTAAGAGAGAAAGCTATCAGCAAAAACAGCCGTGTAGACATTTTGCCCGGGGAAGATGCTATTTTGGAGATAACTGCAAATTCTTGCATGATTTGGGACAAAGGGAATGCATGAACTGA 1422 0.4184 MATNDSTMEFHEISSETEEGSNLSSEYDDDSEQDPDYDMLEETHRSFSNLSLRNKAKKRIVEDKGLATTEINSEGIEITASSLDDENSETVQKIIKAGLLEKLKVDECKMYLKKNGLRLTGNKDTLIQRIKEHLEIINGGGEKKYPPQSFVLNCKGDACTGDVVLFEQNVYEMFNIASRSASGPPCGKRIVAGRIVKESYGAAKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRNLYRLKTLRQKWEDEGKRQKMLMEKHSRGDVARADREARIQEKERRKTMKENRISKKDSAKNQSQSHSCIAATRSQKQPQETTKAFINLEKPQFPSQHSVSSANTSIATPAIVNKPAAVTEQRSRPIDSRTVAMGSDQFRNSGQSSFNANYYSTDYHCRDKPTTFVKTNNFTERSYQRKPLASTNQLHSHVANADHVHMSIPKRESYQQKQPCRHFARGRCYFGDNCKFLHDLGQRECMN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02994 473 MobiDBLite consensus disorder prediction 294 313 - -
Car07g02994 473 MobiDBLite consensus disorder prediction 22 37 - -
Car07g02994 473 MobiDBLite consensus disorder prediction 256 313 - -
Car07g02994 473 MobiDBLite consensus disorder prediction 1 42 - -
Car07g02994 473 Pfam SAP domain 100 134 IPR003034 -
Car07g02994 473 Pfam CCCH-type zinc finger 445 465 IPR041367 -
Car07g02994 473 MobiDBLite consensus disorder prediction 256 293 - -
Car07g02994 473 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 9 466 IPR045124 GO:0003723|GO:0045892
Car07g02994 473 Gene3D SAP domain 81 146 IPR036361 -
Car07g02994 473 SUPERFAMILY SAP domain 89 135 IPR036361 -
Car07g02994 473 Coils Coil 264 284 - -
Car07g02994 473 Gene3D - 430 473 - -
Car07g02994 473 SMART sap_9 100 134 IPR003034 -
Car07g02994 473 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE 9 466 - -
Car07g02994 473 ProSiteProfiles SAP motif profile. 100 134 IPR003034 -
Car07g02994 473 SMART c3hfinal6 441 466 IPR000571 GO:0046872
Car07g02994 473 ProSiteProfiles Zinc finger C3H1-type profile. 440 467 IPR000571 GO:0046872
Car07g02994 473 SUPERFAMILY CCCH zinc finger 441 465 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02994 Car-Chr7 56618450 56623420 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Car07g02994 SAP 3.2e-09 CL0306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02994 - - gmx:100815642 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02994 07 56618450 56623420 Car07g02994 07 56618450 56623420 ECH