Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02992 ATGGCTGATTCTTCCTTTGAGATAGACTACAACTCTTCAACCAATCATACAAGACACTATCCAACTCCTGTGAGTTACCACAGTGTATCCGGCTCTAGCTCCTTCATACATTCAACTTCTCGAAGCAATGCAACTCCGACAACACGAAGAACTCGCCACAACAAAGTTCCATCCACACCCTTTGCTTCAGATGATGACCGATCATGGCAAGGAGAAGTTTCTTGGAAGTTTAAGCCAATTGGGCTGCGCGAATATAGCACAGACTTTGGTTCTGTTCTTAGTCCATGGCCAACCAACTCCATCTCTAATCATAGCCATGTGTTTAGCCGATCGGCTAATGACTATTACCTTTCGCGAATAGGTGGTTTTAGAGACATCAAAAACTCGTCGCACGAACATTCTTCCTATGGAAGAGTTGAACTAAGGAGTCATGTTGCTAGAGACAACAATGATCATAGCTACTTTGATCAATATAGTGGATTCTCAAAATTGGGAATCATAAAAAAAGGGGTTAGTGGAAATCGAAATATTAGTAATAAGACTAGTCCATTAGCTGAGGAAGACGAACTTAGCGCGGTAGATTACAGTATAAGTGATGAACGTGTTATTTCACCTTATAGGATTAATGATCATGGTCTTGATGAGTTGTCATATGTTAAACATGATCATGGAGTGCCATCATATGGTAGTAAACCACCTAGCCAAATTTATGGTGGTTATAGTAACTATGAGAGTAAAATGGTATCAGAATATGAGGAAGATATGGATGAAGAAGATGGTGCTGGTCCTCCTAAGACAGTTGGGTTGTTTAGTTTGTTTAGGTATACAAGAAAGTGGGATTGGTTACTTGTGTTTGTTGGTTGTTTAGGTGCTCTTATAAATGGAGGATCACTTCCTTGGTATTCTTATCTTTTTGGTAAATTGGTTAATAAGCTTTCAGGAGAAGCTAAAAATGACAAAGATCTGATGATGAAGGATGTAGAGAAGATATGTGAATTTATGGCTGGCTTAGCTGCAGTTGTGGTAATTGGAGCATATATGGAGATCACATGTTGGAGGTTAGTAGGGGAGAGATCAGCTCAAAGAATAAGAACTGAGTATCTAAGAGCAATTCTTAGACAAGACATAAGTTTTTTTGATACAGAGATAAATACTGGTGATATTATGCATGGAATTGCTAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGAGAAGATGGCTCACTTCATTCATCATGTATTTACATTCATATGTGGATATGCAGTTGGGTTTAGAAGATCATGGAAAGTCTCATTGGTTGTATTCTCAGTCACTCCATTAACAATGTTCTGTGGTATGGCTTACAAAGCACTTTATGGTGGTCTTACAGCAAAAGAGGAAGCTTCTTATAGAAAAGCTGGTAGCATTGCAGAACAAGCCATAAGTTCAATTAGGACAGTGTTTTCATTTGTAGCTGAGAGCCAGCTGGGTGAAAAATATTCAGAACAACTTCAAAAATCAGCTCCAATTGGAGCTAAAATTGGTTTTGCTAAAGGTGCAGGCATGGGTGTTATTTACTTAGTAACATATTCAACATGGGCTTTGGCTTTTTGGTATGGCTCTATCTTAATTGCCAAGGGTGAACTTGATGGAGGTTCAGCTATTGCTTGTTTCTTTGGTGTCAATGTTGGGGGAAGAGGCTTGGCACTAGCACTATCATATTTTGCACAATTTGCACAAGGAACTGTTGCAGCAAGCCGTGTATTCTTTATCATAGAGAGAGTTCCTGAGATTGATCCCTATAATCCTGAGGGTGGGAAACTTTCCTCAGTTCGTGGAAGGATTGAGTTAAAGAATGTTAGTTTTGCATATCCATCTCGTCCTGATTCACTTATACTTAATTCCATTAATTTGGTATTTCCATCTTCAAAAACTTTGGCATTGGTTGGTGCAAGTGGTGGTGGAAAGTCAACTATCTTTGCTCTCATAGAGAGGTTTTATGATCCTATAGAAGGGATTATTACCTTGGATGGTCATGATTTGAGGACACTGCAAGTGAAGTGGTTAAGGGATCAGATTGGGATGGTTGGCCAGGAGCCAATTCTGTTTGCTACATCTATACTTGAAAATGTGATGATGGGGAAGGATAATGCCACCAAGGAAGAGGCAATATCTGCTTGTATTGCTGCTGATGCTCACAACTTCATTTCTAACCTCCCACTACGCTATGACACTCAGGCTGGTGATAGGGGTACAAAACTTTCAGGAGGTCAAAAGCAGAGAATTGCATTGGCTAGAGCAATGATAAAGAATCCTAAAATCCTTCTTTTAGATGAACCTACTAGTGCTCTTGATGCTGAGTCAGAGTCTGCAGTCCAAAGGGCCATTGACAAGATTTCAGCAGGCAGAACAACCATTGTCATTGCTCACAGGATAGCAACAGTGAAGAATGCTGATGCCATTGTAGTTCTTGAACATGGTTCTGTCACTGAGATCGGCGACCATCGCCAGCTTATGGCGAAAGCCGGAACCTACTACAACCTTGTCAAGCTTGCAACTGAATCCATTTCAAAACCTCTTCTTCCTATAGAAAATGGCATTCAAAAAACCAATGATTTATCATCCATCAATTATAAATCTGCTCCTGATATAACAAGATCAAGATATCTAGTCGATATCTCGAGGTCTAAAACAGTGGATTCAATGCAGGATAAAGAACAAGAAGATATGGAAGATAAACAATACAAAAAACCAAGAAAATACAGACTTTCTGAGGTATGGAAATTGCAAAAGCCAGAGTTTATGATGCTATTTTCAGGCCTTGTTATGGGAATGTTTGCAGGTGCTTTTCTGTCCCTTTTTCCATTGGTTTTAGGCATATCCCTTGGAGTATATTTTGGCAATGACACTTCCAAAATGAAAAGAGATGTAGGGTACCTTTGTTTAGTACTTGTTGGCCTTGGATTTGGTTGTATACTTTCCATGACAGGACAACAAGGTTTGTGTGGTTGGGCAGGATCAAAGCTAACACTAAGGGTTAGAAACCTCTTGTTTCAATCCATTCTTAGACAAGAACCTGGATGGTTTGATTTTGATGAAAACTCCACCGGTGTATTGGTTTCAAGGCTCTCGATAGACTCAGTTAGTTTTCGTTCGGTACTCGGCGACAGATTCTCAGTCCTTCTTATGGGGTTAAGTTCAGCAGCTGTTGGACTTGGTGTTTCCTTTGTATTTAATTGGAAACTAACCCTTGTTGCAGCTGCTGTAACCCCTTTAACTCTTGGTGCAAGTTACATAAACTTGATCATAAACATTGGTCCAAAAGTTGATAACAACTCTTATGCAAAAGCTAGCAACATTGCTTCTGGTGCAGTTTCAAATATAAGGACAGTTGCTACATTTTCAGCTCAGGAACAAATAGTCAATTCCTTTGATAGAGCCTTATCAGAACCTAGGAAAAAGTCCTTAAAAAGTTCACAGCTTCAAGGTCTTGTATTTGGATTCTTTCAAGGTGCAATGTATGCAGCATACACCTTAACTCTTTGGTTTGGTGCATACCTTGTAAAACTTAACAAAGGTGATTTTGAAGATGTTTATAAGATTTTTCTCATTCTTGTTTTGAGTTCATTTTCTGTTGGACAACTAGCTGGTTTAGCACCAGATACTTCTATGGCTGCTACAGCAATTCCATCAGTTCAAGATGTTATAAACAGAAAACCATTGATAGGGAATGATGGAAGAAAAAGTAGGAAAGTTGACAGATCAAAGCCTTTTAAAATAGAATTCAAAATGGTGACATTTGCATATCCATCAAGGCCTGAGGTAACTGTGTTGAGGGATTTCTGTTTGAAGGTTAAAGGTGGAAGCACAGTGGCTTTGGTGGGACCAAGTGGATCAGGAAAATCAACAGTTGTGTGGCTGACACAGAGGTTCTATGATCCTGATCAAGGAAATGTGATGATGGGTGGTGTGGATTTGAGGGAGATTGATGTGAAGTGGTTGAGGAGACAAATAGGTTTAGTTGGTCAAGAACCTGCATTGTTTGCTGGGAGCATAAGGGAAAATATTGCATttggagaccaaagtgcttcatgggctgaaattgaagctgctgcaaaagaggcttacatccaCAAGTTCATCAGTGGCCTTCCTCAGGGTTATGAAACTCAGGTTGGTGAAAGTGGGGTCCAATTATCAGGTGGACAGAAACAAAGGATTGCTATAGCAAGGGCCATATTGAAGAAATCAAAGGTGCTTTTGCTTGATGAAGCAAGCAGTGCATTGGACTTGGAATCAGAGAAACACATTCAAGAAGCTCTTAAGAATGTTTCAAAAGAGGCAACAACAATAATAGTTGCACACCGTCTTTCCACAATAAGAGATGCTGATAAAATTGCAGTCATGAGAAATGGAGAAGTGGTTGAGTATGGAAGCCATGACACTCTCATTTCTTCCATTCAAAATGGTTTGTATGCTAGCCTTGTTCGAGCTGAGACTGAAGCCAATGCCTTTTCTTGA 4503 0.3909 MADSSFEIDYNSSTNHTRHYPTPVSYHSVSGSSSFIHSTSRSNATPTTRRTRHNKVPSTPFASDDDRSWQGEVSWKFKPIGLREYSTDFGSVLSPWPTNSISNHSHVFSRSANDYYLSRIGGFRDIKNSSHEHSSYGRVELRSHVARDNNDHSYFDQYSGFSKLGIIKKGVSGNRNISNKTSPLAEEDELSAVDYSISDERVISPYRINDHGLDELSYVKHDHGVPSYGSKPPSQIYGGYSNYESKMVSEYEEDMDEEDGAGPPKTVGLFSLFRYTRKWDWLLVFVGCLGALINGGSLPWYSYLFGKLVNKLSGEAKNDKDLMMKDVEKICEFMAGLAAVVVIGAYMEITCWRLVGERSAQRIRTEYLRAILRQDISFFDTEINTGDIMHGIASDVAQIQEVMGEKMAHFIHHVFTFICGYAVGFRRSWKVSLVVFSVTPLTMFCGMAYKALYGGLTAKEEASYRKAGSIAEQAISSIRTVFSFVAESQLGEKYSEQLQKSAPIGAKIGFAKGAGMGVIYLVTYSTWALAFWYGSILIAKGELDGGSAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFFIIERVPEIDPYNPEGGKLSSVRGRIELKNVSFAYPSRPDSLILNSINLVFPSSKTLALVGASGGGKSTIFALIERFYDPIEGIITLDGHDLRTLQVKWLRDQIGMVGQEPILFATSILENVMMGKDNATKEEAISACIAADAHNFISNLPLRYDTQAGDRGTKLSGGQKQRIALARAMIKNPKILLLDEPTSALDAESESAVQRAIDKISAGRTTIVIAHRIATVKNADAIVVLEHGSVTEIGDHRQLMAKAGTYYNLVKLATESISKPLLPIENGIQKTNDLSSINYKSAPDITRSRYLVDISRSKTVDSMQDKEQEDMEDKQYKKPRKYRLSEVWKLQKPEFMMLFSGLVMGMFAGAFLSLFPLVLGISLGVYFGNDTSKMKRDVGYLCLVLVGLGFGCILSMTGQQGLCGWAGSKLTLRVRNLLFQSILRQEPGWFDFDENSTGVLVSRLSIDSVSFRSVLGDRFSVLLMGLSSAAVGLGVSFVFNWKLTLVAAAVTPLTLGASYINLIINIGPKVDNNSYAKASNIASGAVSNIRTVATFSAQEQIVNSFDRALSEPRKKSLKSSQLQGLVFGFFQGAMYAAYTLTLWFGAYLVKLNKGDFEDVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPSVQDVINRKPLIGNDGRKSRKVDRSKPFKIEFKMVTFAYPSRPEVTVLRDFCLKVKGGSTVALVGPSGSGKSTVVWLTQRFYDPDQGNVMMGGVDLREIDVKWLRRQIGLVGQEPALFAGSIRENIAFGDQSASWAEIEAAAKEAYIHKFISGLPQGYETQVGESGVQLSGGQKQRIAIARAILKKSKVLLLDEASSALDLESEKHIQEALKNVSKEATTIIVAHRLSTIRDADKIAVMRNGEVVEYGSHDTLISSIQNGLYASLVRAETEANAFS 1500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02992 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1250 1491 IPR027417 -
Car07g02992 1500 SMART AAA_5 636 822 IPR003593 -
Car07g02992 1500 SMART AAA_5 1281 1467 IPR003593 -
Car07g02992 1500 ProSitePatterns ABC transporters family signature. 1393 1407 IPR017871 GO:0005524
Car07g02992 1500 CDD ABC_MTABC3_MDL1_MDL2 1254 1492 - -
Car07g02992 1500 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524
Car07g02992 1500 MobiDBLite consensus disorder prediction 1 65 - -
Car07g02992 1500 Gene3D ABC transporter type 1, transmembrane domain 271 1222 IPR036640 GO:0005524|GO:0016021
Car07g02992 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 602 845 IPR027417 -
Car07g02992 1500 Pfam ABC transporter 1273 1420 IPR003439 GO:0005524
Car07g02992 1500 Pfam ABC transporter 627 776 IPR003439 GO:0005524
Car07g02992 1500 SUPERFAMILY ABC transporter transmembrane region 266 594 IPR036640 GO:0005524|GO:0016021
Car07g02992 1500 CDD ABC_6TM_Pgp_ABCB1_D1_like 285 582 - -
Car07g02992 1500 PANTHER ABC TRANSPORTER B FAMILY 204 1499 - -
Car07g02992 1500 CDD ABC_6TM_Pgp_ABCB1_D2_like 921 1236 - -
Car07g02992 1500 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 609 845 IPR003439 GO:0005524
Car07g02992 1500 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 934 1218 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g02992 1500 SUPERFAMILY ABC transporter transmembrane region 920 1234 IPR036640 GO:0005524|GO:0016021
Car07g02992 1500 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 285 574 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g02992 1500 Pfam ABC transporter transmembrane region 284 556 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g02992 1500 Pfam ABC transporter transmembrane region 934 1202 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g02992 1500 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1254 1490 IPR003439 GO:0005524
Car07g02992 1500 PANTHER - 204 1499 - -
Car07g02992 1500 CDD ABC_MTABC3_MDL1_MDL2 609 846 - -
Car07g02992 1500 Gene3D - 599 847 IPR027417 -
Car07g02992 1500 MobiDBLite consensus disorder prediction 1 66 - -
Car07g02992 1500 Gene3D - 1248 1499 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02992 Car-Chr7 56572393 56580592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02992 927 1497 Calmodulin-binding Proteins AT2G36910 38.408 1.20e-105 365
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02992 07 56572393 56580592 Car07g02992 07 56572393 56580592 ECH