Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02988 ATGGCTAATGAAGGAAACAAAAGCAATGATTTCTATTCAATCTTGGGATTGAATAAGGAATGCACTGATTCAGAGTTAAGGAATGCTTATAAGAAACTTGCACTGAAATGGCATCCAGATCGTTGTTCAGCTTCAGGGAATGTGAAGTTTGTGGAAGAAGCTAAGAAGAAATTTCAGGCTATTCAAGAAGCCTATTCTGTTTTATCTGACGCGAACAAAAGATTAATGTACGATGTTGGAGTTTATGACAGTGATGACGACGAAAACGGTATGGGTGACTTCTTGAACGAAATGGTTACAATGATGAGCCAAACTAAATCTAATGAAAATGGAGAAGAGAGCTTTGAAGAGTTGCAACAATTATTTGAAGATATGTTTCAATCGGATATTGGATTAGGTGGAAGCACTTCTTTTACAGCTTCTAGTTGCTCTACTTCATCTACTTTCATGACTTATAATGAAAGTTCTAATTCTAATAAACGCAATTCAACTCAAATGAATTGTGGAAAGGCAGAGGATTCTTCTAGCTATGATGCCAATTACCAGAACTTCTGTTTTGGGGATACAAAACAATGGAGTATGTATGGAGTTTAA 594 0.3586 MANEGNKSNDFYSILGLNKECTDSELRNAYKKLALKWHPDRCSASGNVKFVEEAKKKFQAIQEAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTKSNENGEESFEELQQLFEDMFQSDIGLGGSTSFTASSCSTSSTFMTYNESSNSNKRNSTQMNCGKAEDSSSYDANYQNFCFGDTKQWSMYGV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02988 197 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 190 - -
Car07g02988 197 CDD DnaJ 10 70 IPR001623 -
Car07g02988 197 PRINTS DnaJ domain signature 12 30 IPR001623 -
Car07g02988 197 PRINTS DnaJ domain signature 30 45 IPR001623 -
Car07g02988 197 PRINTS DnaJ domain signature 53 73 IPR001623 -
Car07g02988 197 PRINTS DnaJ domain signature 73 92 IPR001623 -
Car07g02988 197 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Car07g02988 197 SUPERFAMILY Chaperone J-domain 7 93 IPR036869 -
Car07g02988 197 Pfam DnaJ domain 10 78 IPR001623 -
Car07g02988 197 Gene3D DnaJ domain 7 137 IPR036869 -
Car07g02988 197 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Car07g02988 197 PANTHER PUTATIVE, EXPRESSED-RELATED 1 190 - -
Car07g02988 197 SMART dnaj_3 9 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02988 Car-Chr7 56530446 56534833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02988 11 78 C2H2 Transcription Factor Family AT1G74250 39.706 2.57e-11 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02988 07 56530446 56534833 Car07g02988 07 56530446 56534833 ECH