Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02963 ATGGATACAATCAAATCCTTCAAAGGTTACGGCAAAGTAGACGAAATAGAACAACAAGCATTTCAAAAAAAGACACGTAAGCGCATGATAACCATAATAATCTCTTCCGTTATTCTATTAGCGGTCATCATTGCCGCAGTAGCAGGAGTCCTCATACACAAGCGCACCACCCAATCATCTCCTTCTTCATCTGACTCGCTCCCTAACACTGAGTTAAACCCGGCCGCGTCACTCAAAGCCGTTTGTCACGCGACTCAGTACCCTAACTCGTGCTTCTCCGCAATCTCTTCTCTTCCAGATTCCAACACCACTGACCCCGAACAACTCTTCAAGCTTTCACTCAAAGTCGCCATTGATGAACTCGCCAAACTCACGCGCTTTCCTTCCAAGCTCAGCGCGCGTGCAGACACGCGCCTTAAGAAAGCTATTGGTGTTTGCGGTGAAGTTCTCGACGACGCGCTTGATCGTTTAAACGATTCGATGTCGTCGATCGTCGGCGCCGGGAAGATTCTATCTCCGGAGAAGATCCGTGATGTTGAGACTTGGCTTAGTGCTGCTTTAACAGATCATGCTACGTGTTTGGAAGCTGTTGATGAAGTGAACTCCACTGCCGCGCGTGGTGTTCTTCGCGAAATTGAAACCGCCATGAAAAACTCGACGGAGTTCGCGAGTAACAGTTTGGCGATTGTGACGAAGATTATTGGACTTCTTTCAAATTTTGAGACTTCGAATCATCACCGGAGGTTGCTCGGAGGGTTTCCGGAGTGGTTGGGATCGGCGGAGAGAAAGCTTCTGGCAACTGAGGTGAACGAGACGAAGCCGGATGCGGTGGTGGCGAAGGACGGTACTGGACAGTTCACGACGATAACGGAGGCGCTGAAGATGGTGAATAAGAAGAGCGTGAAGAGGTTTGTGGTGTATGTGAAGAAAGGGGAATACATAGAGAACATTGATATAGATAAGAAAACTTGGAATGTGATGATTTATGGTGATGGCATGTCGGAAACCGTCGTGCTCGGTAGCCGGAATTTCATGGACGGCACACCTACCTTTGAAACTGCCACTTTCGCTGTCAAAGGCATGGGATTCATTGCTAAAGACATAAAATTTGTGAACACCGCAGGTGCATCTAAGCACCAGGCTGTGGCATTGCGATCCGGCTCGGATCGATCTGTGTTCTACAGGTGTTCATTTGTAGGATACCAGGATACCCTTTATGCACATTCAAATCGTCAATTCTACCGCGAGTGTGACATTACAGGCACCATAGATTTCATATTCGGAAACGCAGCTGTGGTGTTCCAAAATTGCAGAATCATGCCTAGGCAGCCAATGTCAAACCAGTTCAACACAATCACAGCTCAGGGAAAAAAGGATCCAAATCAGAATACTGGAATTGTGATCCAGGGATCAACTATCACTACACTACCAAATGACAATCTCACAGCACCCACTTACCTTGGTAGGCCATGGAAAGATTTCTCCACCACTGTTATCATGAAAACAGAGATTGGGTCATTCTTGAATTCAGTTGGGTGGATAAGTTGGGTTTTCAATGTTGAACCTCCAAGTACAATCTTCTATGCTGAATACCAGAACACTGGGCCAGGAGCAGGCGTATCGCAGCGAGTTAAATGGGCCGGTTATAAGCCCACTATAAGCGACGAAGAAGCTCTAAAATTCACAGTGGATTCCTTTATTCAGGGCCCTGAGTGGTTACCAAGTGCTTCTGTGCAGTTTGAGCCTACCTTGTGA 1755 0.4712 MDTIKSFKGYGKVDEIEQQAFQKKTRKRMITIIISSVILLAVIIAAVAGVLIHKRTTQSSPSSSDSLPNTELNPAASLKAVCHATQYPNSCFSAISSLPDSNTTDPEQLFKLSLKVAIDELAKLTRFPSKLSARADTRLKKAIGVCGEVLDDALDRLNDSMSSIVGAGKILSPEKIRDVETWLSAALTDHATCLEAVDEVNSTAARGVLREIETAMKNSTEFASNSLAIVTKIIGLLSNFETSNHHRRLLGGFPEWLGSAERKLLATEVNETKPDAVVAKDGTGQFTTITEALKMVNKKSVKRFVVYVKKGEYIENIDIDKKTWNVMIYGDGMSETVVLGSRNFMDGTPTFETATFAVKGMGFIAKDIKFVNTAGASKHQAVALRSGSDRSVFYRCSFVGYQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQNCRIMPRQPMSNQFNTITAQGKKDPNQNTGIVIQGSTITTLPNDNLTAPTYLGRPWKDFSTTVIMKTEIGSFLNSVGWISWVFNVEPPSTIFYAEYQNTGPGAGVSQRVKWAGYKPTISDEEALKFTVDSFIQGPEWLPSASVQFEPTL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02963 584 PANTHER PECTINESTERASE 1-RELATED 8 581 - -
Car07g02963 584 Gene3D - 269 584 IPR012334 -
Car07g02963 584 Pfam Pectinesterase 275 569 IPR000070 GO:0030599|GO:0042545
Car07g02963 584 SMART PMEI_2 73 229 IPR006501 GO:0004857
Car07g02963 584 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
Car07g02963 584 CDD PMEI-like_3 80 233 - -
Car07g02963 584 SUPERFAMILY Pectin lyase-like 273 581 IPR011050 -
Car07g02963 584 TIGRFAM PME_inhib: pectinesterase inhibitor domain 63 232 IPR006501 GO:0004857
Car07g02963 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 76 234 IPR035513 -
Car07g02963 584 PANTHER PECTINESTERASE 8 581 - -
Car07g02963 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 234 IPR035513 -
Car07g02963 584 Pfam Plant invertase/pectin methylesterase inhibitor 78 229 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02963 Car-Chr7 56194923 56198665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02963 1 578 Carbohydrate Esterase AT1G53840 58.010 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02963 - - gmx:100777128 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02963 07 56194923 56198665 Car07g02963 07 56194923 56198665 ECH