Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02962 ATGAACAAAATAAAACAATCCCTCACCAGAATCTCAAATTCCAACAAGAAAAAGCTCTTCTTTTCCCTCTTCACAGCCCTTCTCATTACAGCTTCAATTATAGCCATTTCAGCATCAGTAACATCTTCACAAAAAACCAAAACCAAAAACAACATTGTTTCTTCTTCTCTTTCACTCTCTCACCATTCTCACACAATAATCAAAACCGCTTGCACAACTACACTTTACCCTGATCTCTGTTTCTCTGCCATTTCATCTGAACCAAACATAACACACAAAATCAACAACCATAAAGATGTTATTTCTCTCTCTCTTAACATCACTACAAGAGCTGTTGAACACAATTTCTTCACAGTTGAGAATCTCCTGAGACGAAAAAATCTCTCTGAAAGAGAGAAAATCGCTCTTCACGATTGTTTGGAAACTATAGATGATACATTAGATGAGCTTAAAGAAGCTCAGAGAGATCTTTTGTTGTACCCGAATAAAAAGACACTTTATCAACATGCTGATGATCTTAAAACACTCATTAGCGCCGCCATAACTAACCAGGTAACTTGCTTGGATGGATTCTCACACGACGGCGCCGATAAGCAAGTAAGGAAGGTTCTAGAACAAGGACAAGTCCACGTGGAACACATGTGTAGCAATGCATTGACCATGACTAAGAACATGACAGACAAAGACATAGCAAAATTCGAAGAAAACAACAACAAAAAGAATAGGAAATTATTGGAAGAAGAAAATGGTGTGAACTGGCCGGAGTGGATTTCGGCCGGTGACAGGAGATTACTTCAAGGTGCGGCGGTGAAGGCGGATGTGGTCGTGGCGGCGGACGGAAGTGGGAATTTTAAGACGGTGTCGGAGGCGGTGGCGAGTGCTCCTTTGAAGAGTAGTAAGAGATATGTTATAAAGATAAAAGCAGGGGTGTATAAAGAAAATGTGGAGGTGCCAAAGAAAAAGAGTAATATAATGTTTTTGGGAGATGGTAAAAAGAATACTATTATCACTGCTAGTAGAAATGTTGTTGATGGAAGCACCACTTTTCACTCTGCTACTGTTGCCGTAGTGGGAGGAAATTTTTTGGCACGAGACATAACATTTCAAAATACAGCGGGTCCCTCAAAGCACCAAGCAGTGGCACTAAGAGTTGGTGGTGACCTATCAGCTTTCTACAACTGTGACATAATAGCATACCAAGATACACTTTATGTTCACAACAATCGTCAATTCTTTGTCAATTGTTTCATTTCAGGAACAGTTGATTTCATTTTTGGTAACTCAGCTGTTGTGTTCCAAAATTGTGACATTCATGCTAGGAAACCTGATTCAGGTCAAAAAAACATGGTCACTGCACAAGGTAGGGTTGATCCTAATCAAAACACTGGAATTGTTATACAAAAATGTAGGATTGGTGCTACTAAGGATTTGGAAGGGTTAAAGGGTACTTTCCCTCTATATTTAGGGAGGCCATGGAAGCAATATTCTAGAACAGTGATTATGCAAAGTAGTATTAGTGATGTTATTGACCCTATTGGGTGGCATGAGTGGAATGGTAATTTTGCTTTGAATACTTTGGTTTATAGAGAATATCAAAATACTGGGCCTGGTGCTGGAACTTCTAAGAGGGTTAATTGGAAAGGGTTTAAGGTTATTACTAGTGCTTCTGAGGCCCAAACTTTTACTCCTGGAAATTTTATTGGTGGCTCTACTTGGTTGGGCTCTACTGGCTTTCCTTTCTCTCTTGGCCTTTAA 1755 0.396 MNKIKQSLTRISNSNKKKLFFSLFTALLITASIIAISASVTSSQKTKTKNNIVSSSLSLSHHSHTIIKTACTTTLYPDLCFSAISSEPNITHKINNHKDVISLSLNITTRAVEHNFFTVENLLRRKNLSEREKIALHDCLETIDDTLDELKEAQRDLLLYPNKKTLYQHADDLKTLISAAITNQVTCLDGFSHDGADKQVRKVLEQGQVHVEHMCSNALTMTKNMTDKDIAKFEENNNKKNRKLLEEENGVNWPEWISAGDRRLLQGAAVKADVVVAADGSGNFKTVSEAVASAPLKSSKRYVIKIKAGVYKENVEVPKKKSNIMFLGDGKKNTIITASRNVVDGSTTFHSATVAVVGGNFLARDITFQNTAGPSKHQAVALRVGGDLSAFYNCDIIAYQDTLYVHNNRQFFVNCFISGTVDFIFGNSAVVFQNCDIHARKPDSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLEGLKGTFPLYLGRPWKQYSRTVIMQSSISDVIDPIGWHEWNGNFALNTLVYREYQNTGPGAGTSKRVNWKGFKVITSASEAQTFTPGNFIGGSTWLGSTGFPFSLGL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02962 584 ProSitePatterns Pectinesterase signature 2. 417 426 IPR033131 -
Car07g02962 584 PANTHER PECTINESTERASE 15 583 - -
Car07g02962 584 Coils Coil 230 250 - -
Car07g02962 584 TIGRFAM PME_inhib: pectinesterase inhibitor domain 54 225 IPR006501 GO:0004857
Car07g02962 584 SMART PMEI_2 62 221 IPR006501 GO:0004857
Car07g02962 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 226 IPR035513 -
Car07g02962 584 CDD PMEI-like_3 69 226 - -
Car07g02962 584 PANTHER PECTINESTERASE 15 583 - -
Car07g02962 584 Coils Coil 136 156 - -
Car07g02962 584 Pfam Plant invertase/pectin methylesterase inhibitor 66 221 IPR006501 GO:0004857
Car07g02962 584 Pfam Pectinesterase 273 569 IPR000070 GO:0030599|GO:0042545
Car07g02962 584 SUPERFAMILY Pectin lyase-like 268 583 IPR011050 -
Car07g02962 584 Gene3D - 267 584 IPR012334 -
Car07g02962 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 226 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02962 Car-Chr7 56184284 56190078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02962 15 584 Carbohydrate Esterase AT3G14310 67.007 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02962 K01051 - gmx:100776623 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02962 07 56184284 56190078 Car07g02962 07 56184284 56190078 ECH