Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02958 ATGGGTGCAACTGCAACATCAAGTAACGCATTAGGTGATTCTGATACTGATACAATTGAAATAACAGGAAAAATCATGGTGGTAGCTATAATTTTCCTATTTGTAGTTGTTGTGTTTGTTATAATGCTTCACTTATATGCAAAGTTGTTTTGGTGGCGTTTTAATCAGAGTAGTACTGCTCCTCCACCACGAAACCGCCGCCCCCGTCGGCGGCGGTTTGTTTTTGCTCCAGGTGAAGATGCTGTCATCTATGAGACTCAACAAGATGGACTTGACCCTTTGATTCTTAAATCTTTTCCGGTTATTGTTTTTCAATCAGAAGATTTCAAAGATGGTTTGGAATGTGCTGTTTGTCTTTGTGATATAGTTGAAGGAGAAAAAACTAGACTTTTACCAAAATGCAATCATGGGTTTCATGTAGATTGTATTGATATGTGGTTTCAATCTCATTCTACTTGCCCTCTTTGTAGGAATCCAGTTTCAATTTCTTGTGAATCATCTAAACCAAATAATACTATTTCAAATGGTGAAGATGTCAATGTTTTAATGTCAAGCAATAATGATTTATTAGAAGATGAAAATTTGAGTCATGTGGATGGTTTTGAGTCTTCAAATTTTCCAACAAATGTTTTAGTTTGGGGGAATTGTCAAACACAAGTTAGTTCTTTTGGTGTTATTTCATTGGAAGAAGAAGGAGGAGGAGGAAATTCTCAGCAACAACCTTGTTCTTCCTCAAACTCATCATCTTCATCAACATCTTGTACAGCTAGTGATTGTGTTAATAGTAGATGTCATGGAAATGGAATGTTGGTGATTGATATACCTAGTGAGTTTAGTTCTTCCTCTTTGTCACCTTCTGCTATAAGGTGTTCTGAAGATGAAATGAAATCACCAATGCCAACGAGATTGAGATCATTTAAGAGGCTTTTAAGTAGGGACAAAAAGTTAAGTCCTTGTAGTCCTAGTTCTATGGATGTTGAACAAGGCCAAAGCTAA 996 0.3635 MGATATSSNALGDSDTDTIEITGKIMVVAIIFLFVVVVFVIMLHLYAKLFWWRFNQSSTAPPPRNRRPRRRRFVFAPGEDAVIYETQQDGLDPLILKSFPVIVFQSEDFKDGLECAVCLCDIVEGEKTRLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVSISCESSKPNNTISNGEDVNVLMSSNNDLLEDENLSHVDGFESSNFPTNVLVWGNCQTQVSSFGVISLEEEGGGGNSQQQPCSSSNSSSSSTSCTASDCVNSRCHGNGMLVIDIPSEFSSSSLSPSAIRCSEDEMKSPMPTRLRSFKRLLSRDKKLSPCSPSSMDVEQGQS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02958 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 162 IPR013083 -
Car07g02958 331 MobiDBLite consensus disorder prediction 312 331 - -
Car07g02958 331 MobiDBLite consensus disorder prediction 232 250 - -
Car07g02958 331 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 14 328 IPR044675 -
Car07g02958 331 SUPERFAMILY RING/U-box 95 164 - -
Car07g02958 331 CDD RING-H2_EL5_like 114 157 - -
Car07g02958 331 Pfam Ring finger domain 114 157 IPR001841 -
Car07g02958 331 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Car07g02958 331 PANTHER RING-H2 FINGER PROTEIN ATL3 14 328 - -
Car07g02958 331 MobiDBLite consensus disorder prediction 316 331 - -
Car07g02958 331 SMART ring_2 115 156 IPR001841 -
Car07g02958 331 MobiDBLite consensus disorder prediction 228 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02958 Car-Chr7 56141244 56142814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02958 20 314 C3H Transcription Factor Family AT1G53820 44.444 5.73e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02958 - - cam:101491184 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02958 07 56141244 56142814 Car07g02958 07 56141244 56142814 ECH