Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02952 ATGTCGGTGGATCCATTGCTGATGCTGATTTTCATCAGCACCTGCGCTCTTGTCATCAATGGTGACACAGATCCAAATGATGCCGCTGCTTTAACACTTTTGTTTCAAAGTCTGAACTCACCAGCCCAGCTAAATTGGCCTGCCAATGGTAATGATCCTTGTGGACAGTCTTGGAAAGGCATCACTTGCTCAGGCAACCGAATCACAGAAATTAAGTTACCTGGTCTTGGACTAAGCGGAACTTTAGGTTACCAGCTATCCTTGTCAGCTTTGACAACCCTAGACTTGAGTAACAACAATATTGGTAGCAACATCCCGTACTCGCTTCCTCAAAATTTGCAGCACTTAAATCTTGCTAATAATAACCTCAATGGGGGGATACCTTACTCTCTTTCTGATATTACTTCTCTTATAAGCATGAATCTCGGTCACAATCAGCTCCAACAAGGACTGACTCTCAACTTTCAAAAGCTAACTTCCCTTTCTACATTGGATCTCTCTTTCAATTCTTTAACAGGAGACCTCCCTCAAACTATGAACTCACTTTCAAGCATAACCACCATGTATCTACAAAACAACCAACTTACAGGAACCATTAATGTCCTTGCTGATCTGCCCCTTGAATCATTGAATGTGGAAAACAATCACTTTACAGGCTGGATACCAGAACAATTGAAAAACATAAACATACAAAAGGATGGTAATTCGTGGAGCTCTGGACCGGCACCCCCACCTCCTCCTGGTACACCTCCAATAACAAAAAAAAGCAATACGCACAAGTCCGGTGGACATAGTACCTCGCCGGCTTCTGGCACAAGTGATGAAAGCAAAAAATCCGGTATAGGAGGTGGTGCCATTGCTGGAATAGTGATCTCCATCTTAGTTGTTGGGGCAATAATAGCATTCTTTCTGGTGAAGAGAAGACCCAAGAAGTCATTTAGAGATGTTGAAAAGCTAGACAATCAGCCCTTGGCTCCTCTTACTTCAAATGAAGTGCATGAAATGAATTCAACGCAAACTTCTTCCGTAATTGACTTTAAGACATTTGATGATACTTCTGCGGCCACAATAAGTCTCAAACCCCCTCCTTCTGATCTTCATAAATCATTTGATGAAGATGAGTTTCCAAAGAAGCCAATTGTTGTCAAGAAGACTGTGACAGCTCCTGCAAATCTGAAAGCATATTCTATAGCTGACCTACAGATTGCTACTGGAAGCTTCAGTGTCGATCAACTTCTTGGTGAGGGGTCTTTTGGACGTGTATACCGTGCTCAATTTGATGATGGGAAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTCCTAACAATTTGTCCGAGGATTTTGTGGAAATAGTTTCAAACCTCTCCCGTTTTCATCATCCCAATGTGACGGAGCTTGTAGGTTATTGTTCAGAGCACGGACAGCACCTCTTAGTCTATGAGTTTCACAAAAGTGGATCACTGCACGACTTCCTTCACCTCCCTGATGAGTACACTAAACCATTGATATGGAATTCACGTGTCAAGATTGCATTGGGGATCGCACGTGCTTTAGAGTACCTACATGAAGTTTGTTCGCCATCAGTTGTTCACAAGGACATTAAGTCAGCCAATATATTGCTTGATGTTGATTTTAATCCTCATCTTTCAGACAGTGGATTGGCCAGCTATATTCCAAATGCCAACCAGGTATTGAACAACAATGCTGGATCTGGATACGATGCTCCGGAAGTTGGATTGTCGGGTCAATATACTTTCAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAACTACTAAGTGGACGGAAACCATTTGATAGCTCAAGGTCAAGGTTTGAGCAGTCATTGGTTCGATGGGCGACGCCTCAACTCCATGACATTGATGCATTGGCTAAAATGGTTGATCCTGCACTAGAAGGACTATACCCTGTCAAGTCTCTTTCTCGATTCGCCGACGTTATTGCCCTTTGTGTTCAGGTAATGTCCCAAATTTCTTCTTTTAGGGGGGCTATTTGA 2028 0.427 MSVDPLLMLIFISTCALVINGDTDPNDAAALTLLFQSLNSPAQLNWPANGNDPCGQSWKGITCSGNRITEIKLPGLGLSGTLGYQLSLSALTTLDLSNNNIGSNIPYSLPQNLQHLNLANNNLNGGIPYSLSDITSLISMNLGHNQLQQGLTLNFQKLTSLSTLDLSFNSLTGDLPQTMNSLSSITTMYLQNNQLTGTINVLADLPLESLNVENNHFTGWIPEQLKNINIQKDGNSWSSGPAPPPPPGTPPITKKSNTHKSGGHSTSPASGTSDESKKSGIGGGAIAGIVISILVVGAIIAFFLVKRRPKKSFRDVEKLDNQPLAPLTSNEVHEMNSTQTSSVIDFKTFDDTSAATISLKPPPSDLHKSFDEDEFPKKPIVVKKTVTAPANLKAYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNNLSEDFVEIVSNLSRFHHPNVTELVGYCSEHGQHLLVYEFHKSGSLHDFLHLPDEYTKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKDIKSANILLDVDFNPHLSDSGLASYIPNANQVLNNNAGSGYDAPEVGLSGQYTFKSDVYSFGVVMLELLSGRKPFDSSRSRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQVMSQISSFRGAI 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02952 675 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 13 664 - -
Car07g02952 675 Pfam Leucine Rich Repeat 112 131 IPR001611 GO:0005515
Car07g02952 675 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Car07g02952 675 MobiDBLite consensus disorder prediction 253 277 - -
Car07g02952 675 SUPERFAMILY L domain-like 25 228 - -
Car07g02952 675 SUPERFAMILY Protein kinase-like (PK-like) 389 663 IPR011009 -
Car07g02952 675 PANTHER OS01G0253100 PROTEIN 13 664 IPR045271 GO:0004714|GO:0006468
Car07g02952 675 Gene3D Ribonuclease Inhibitor 24 242 IPR032675 -
Car07g02952 675 ProSiteProfiles Protein kinase domain profile. 407 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02952 675 ProSiteProfiles Leucine-rich repeat profile. 90 112 IPR001611 GO:0005515
Car07g02952 675 SMART serkin_6 407 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02952 675 Pfam Protein kinase domain 408 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02952 675 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Car07g02952 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Car07g02952 675 MobiDBLite consensus disorder prediction 231 279 - -
Car07g02952 675 PRINTS Leucine-rich repeat signature 158 171 - -
Car07g02952 675 PRINTS Leucine-rich repeat signature 91 104 - -
Car07g02952 675 SMART LRR_typ_2 158 182 IPR003591 -
Car07g02952 675 SMART LRR_typ_2 88 112 IPR003591 -
Car07g02952 675 Gene3D Phosphorylase Kinase; domain 1 373 484 - -
Car07g02952 675 Gene3D Transferase(Phosphotransferase) domain 1 486 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02952 Car-Chr7 56031142 56037622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02952 2 663 Strubbelig Receptor Gene Family AT1G53730 64.435 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Car07g02952 Pkinase 3.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02952 - - gmx:100780323 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02952 07 56031142 56037622 Car07g02952 07 56031142 56037622 ECH