Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02942 ATGGCTTCTGCTTGTGCTTCTTCTGCCATTGCAGCTATTGCCATCTCTACCCCAAGTTCTCAGAAGAATGGATCAGCCTTAGGAATCACAAAAGCTTTTCTTGGGAGGAAACTGAAGGTGAACAACAACACATCAGTTAGAGTAAGATCTGCTGCCACAACAAAGTGTGCAGTAGCTGAGCCTGATAGGCCTATTTGGTTCCCAGGAAGCACACCTCCTGCATGGCTTGATGGCAGTCTCCCTGGAGATTTTGGGTTTGATCCTCTTGGTCTTGGATCTGATCCAGAGAGCCTAAGATGGAATGTTCAAGCAGAGCTAGTTCACTGCAGATGGGCAATGTTAGGTGCAGCTGGAATTTTCATTCCAGAATTCCTAACAAAGATTGGTATCTTGAACACACCATCATGGTACACTGCTGGAGAGCAAGAGTATTTCACAGACACCACCACACTCTTCATAATTGAACTCCTTTTCATTGGTTGGGCTGAGGGTAGAAGATGGGCTGACATAATCAATCCTGGTTGTGTCAACACTGACCCTATCTTTCCAAACAACAAGCTCACAGGAACTGATGTGGGCTACCCAGGTGGGCTTTGGTTTGACCCACTTGGTTGGGGAAGTGGTTCTCCTAAAAAACTTAAGGAGTTGAGAACAAAGGAAATTAAGAATGGAAGATTGGCTATGTTGGCTGTGATGGGAGCTTGGTTCCAGCATATATACACAGGCACTGGTCCTATTGATAACCTCTTTGCTCACCTTGCTGATCCTGGACATGCTACTATTTTTGCTGCTTTCACTCCGAAATGA 807 0.4548 MASACASSAIAAIAISTPSSQKNGSALGITKAFLGRKLKVNNNTSVRVRSAATTKCAVAEPDRPIWFPGSTPPAWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIIELLFIGWAEGRRWADIINPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPKKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02942 268 SUPERFAMILY Chlorophyll a-b binding protein 59 266 - -
Car07g02942 268 Pfam Chlorophyll A-B binding protein 72 238 IPR022796 -
Car07g02942 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 268 IPR001344 GO:0009765|GO:0016020
Car07g02942 268 Gene3D Chlorophyll a/b binding protein domain 73 258 - -
Car07g02942 268 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02942 Car-Chr7 55956865 55959783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02942 49 268 Chloroplast and Mitochondria Gene Families AT3G61470 89.545 9.07e-151 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02942 K08908 - gmx:100802138 496.508