Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02939 ATGGAAACAACCTCATTCCCCATTCTTGATTTTGTCCCTGTTGGTTTCAGATTCCGTCCAACAGATGAAGAGCTTGTTAACCACTACCTTAAAAACAAGTTACTTGGTAATGATTCCATTCTTCACAATGTTATAGCTGAAGTTGATGTTTGCAAGTTTGAACCTTGGGACTTACCAGCTTGTTCCGCGATAAAATCTGATGACCCAGAATGGTTTTTCTTGTGTGCTCGTGATTATAAATATGCAAAAAGTAAGAGGCTTAACAGGAGGACAAAGTGTGGTTTTTGGAAAGCTACTGGAAATGATCGTAACATTAAGGTTAGGGGTACTAACAAGGTTATTGGGACTAAGAAGACTCTTGTTTTTTATAAAGGTTGTGTTCCTGGTGTTAAGACCAATTGGGTTATTCATGAGTATCATGCTGTCACCTTTGAGGATAGCCAGAGGAACTTTGTTTTATGTCGCTTGATGAAGAAAGCTGAGAAAAATGGTGAAGATGAAACTGATACAATGATATGTGATGAAGGGGAGCCTAGTAGACCTCTGAGTTCTGACTATGAAAATCAAGAAACAGTAGAAGGAATTTCAGATGTAGACGGTACTTTGCAAGAAATGAACATGGAATCGTTATTTCAGGCGCCTCATCAGGCTGACAGATACTTTCCCTTCTCAACTCAACAATCTTCAATCTTCGAAAATGAGCAGGAGGTATCGTTCCAGAACTATCGATTTCCCGATGCCTATTTTGGAAATGAAAACATCGTTGTGCAAAGTCCATTTGAAACTATTGAAGAGGAAAATAAGTTCATCAAATCAATGTTTATTGATGGAGAGTTTGTTACTAGTGAAAGAAGAAGACATGCTTTTGTCAATGGTCCCACCGAGTCCGAGTCGTTGAGAAGGGTCTATTATCAAAGCATTGACTCAAATGTTGAAGTAGTTTCGACACCGTTTGGTGATATTCCGGACACTTCAACTGCATATCTTGAATATCGTGGTTCAATTGAATACAATGCATCAAATGTGTTTCAATCAATGCATGGTGTTCTACATGGAAGCACATGTCTTGTATCATCTAACAACAGCAATAGCCAAAGTACCTTTCAAGATGATTTCCTGGGAGTGGAGGCATCCTCTTGTGACTCAACTGCAGATAAACCTTCAGAGTTCAATTGTAATGAAAATGAAATTTCTAGTTCTCCTTCCACACTCTAA 1215 0.386 METTSFPILDFVPVGFRFRPTDEELVNHYLKNKLLGNDSILHNVIAEVDVCKFEPWDLPACSAIKSDDPEWFFLCARDYKYAKSKRLNRRTKCGFWKATGNDRNIKVRGTNKVIGTKKTLVFYKGCVPGVKTNWVIHEYHAVTFEDSQRNFVLCRLMKKAEKNGEDETDTMICDEGEPSRPLSSDYENQETVEGISDVDGTLQEMNMESLFQAPHQADRYFPFSTQQSSIFENEQEVSFQNYRFPDAYFGNENIVVQSPFETIEEENKFIKSMFIDGEFVTSERRRHAFVNGPTESESLRRVYYQSIDSNVEVVSTPFGDIPDTSTAYLEYRGSIEYNASNVFQSMHGVLHGSTCLVSSNNSNSQSTFQDDFLGVEASSCDSTADKPSEFNCNENEISSSPSTL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02939 404 MobiDBLite consensus disorder prediction 381 404 - -
Car07g02939 404 ProSiteProfiles NAC domain profile. 12 159 IPR003441 GO:0003677|GO:0006355
Car07g02939 404 MobiDBLite consensus disorder prediction 379 404 - -
Car07g02939 404 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 10 334 - -
Car07g02939 404 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 10 334 - -
Car07g02939 404 Pfam No apical meristem (NAM) protein 13 140 IPR003441 GO:0003677|GO:0006355
Car07g02939 404 MobiDBLite consensus disorder prediction 165 186 - -
Car07g02939 404 Gene3D NAC domain 21 164 IPR036093 GO:0003677|GO:0006355
Car07g02939 404 SUPERFAMILY NAC domain 11 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02939 Car-Chr7 55932565 55936873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02939 9 161 NAC Transcription Factor Family AT4G35580 56.250 2.90e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car07g02939 NAM 4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02939 - - mtr:MTR_8g023840 512.301