Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02938 ATGTTGTTAATGAAAGTCAAAGCAATTTTCAACAAGGATCAACAAGTAACCAACAAGAACATGAGAAAGAACACATGTTTGACAAAATTGAAACANNNNNNNNNNGGGAAACTAAACCGTTTGGTTATACCAAAACAACATGCTGAAAAGTACTTCCCTCTTGATTCAACATCAAATGAAAAAGGTCTTCTTTTGAATTTTGAAGATAGAAATGGAAAATTGTGGAGATTTAGATACTCTTATTGGAATAGTAGTCAAAGCTATGTTATGACAAAAGGTTGGAGCCGTTTTGTTAAAGAGAAAAAACTTGATGCTGGTGACATTGTTTCATTCCAACGTGGTGTTGGTGAATTATTTAGACATAGATTGTATATAGATTGGAGGAGAAGAATatcaaatcatcatcataatcataatattgatccatcatcaacaacaCTTTTCACTCCTTTCTTTCTTCCTAATCCTAATCAACAAAATTTGTCACTTAGGTGGGGGGGTGCTAATAGTAGATTTTACTCTCTTCCTTATCCTTCACCACAATCACAAAGGCATCCACAACAACAAAACCATCTTGACCCTTTTTCACATATGAATTATAATTACCATATGTATCCATTTCATCAACATGGTAGTGGAAATTATCATCATCATGATCCAAGTTCAGTTTTTTATATGAGATCATTAGCACCACCATCAATGTCAATGGTTGATCAAGCAAGacaacaacaacaacaacaacaacaaGTAGTTGGTGGAGTTAATGCTTCTCATTCACAAATGATTATTGAttctgttcctgtttctcatcatcatcatcatcattatcagcatcaGAATCAAAATCATTACCACAGTGCTGGAAATTTAACTAATAGTACTAATAGTGCTGCAAAAAGACTAAGGTTGTTTGGTGTGAACATGGAGTGTGGTAATTCATCAACAAATGAAGAAACTAAATGTTTCATTCctccttcttcttcttcttcatcttctCAACCATCTCTTCAACATTTCAAGACTTCAGAAATTTTGTACAGCTGTCAAAAGGCTAGCAGCCACCTTCTTTGTTTGGTTTATCATAGCAGCACTGTACACATACATGTTTTAGTCATTGACACAATTACAGCTGATACTTTTGGAATTGAATCAAGGAACTTTCCTTTGAAAATCAAGAAAGGAAAAAGTAAAATGACCCTCAAGGTGAGACCATATATATTGAAGATTTGA 1230 0.2984 MLLMKVKAIFNKDQQVTNKNMRKNTCLTKLKXXXXGKLNRLVIPKQHAEKYFPLDSTSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELFRHRLYIDWRRRISNHHHNHNIDPSSTTLFTPFFLPNPNQQNLSLRWGGANSRFYSLPYPSPQSQRHPQQQNHLDPFSHMNYNYHMYPFHQHGSGNYHHHDPSSVFYMRSLAPPSMSMVDQARQQQQQQQQVVGGVNASHSQMIIDSVPVSHHHHHHYQHQNQNHYHSAGNLTNSTNSAAKRLRLFGVNMECGNSSTNEETKCFIPPSSSSSSSQPSLQHFKTSEILYSCQKASSHLLCLVYHSSTVHIHVLVIDTITADTFGIESRNFPLKIKKGKSKMTLKVRPYILKI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02938 409 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 35 335 - -
Car07g02938 409 SUPERFAMILY DNA-binding pseudobarrel domain 28 114 IPR015300 -
Car07g02938 409 CDD B3_DNA 30 113 IPR003340 GO:0003677
Car07g02938 409 ProSiteProfiles B3 DNA-binding domain profile. 26 126 IPR003340 GO:0003677
Car07g02938 409 MobiDBLite consensus disorder prediction 176 195 - -
Car07g02938 409 Gene3D - 21 140 IPR015300 -
Car07g02938 409 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 35 335 IPR044800 GO:0003700
Car07g02938 409 Pfam B3 DNA binding domain 28 130 IPR003340 GO:0003677
Car07g02938 409 SMART B3_2 26 131 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02938 Car-Chr7 55913543 55917815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02938 36 314 RAV Transcription Factor Family AT2G46870 46.786 4.20e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car07g02938 B3 9.1e-25 CL0405