Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02932 ATGAGTTCTAAAGAAAAGAAATTTGTGAGATTTGAAGATTGGAAATCAGAATCATCATCTTTTAATATTGAAAAATATGATTCTTCAATTGATGGACTTGAAAAAAGAAAAGTTAGATCAAGTTTAAGTCCTGCAAACAATGAATCAGAGAAAAAATCAGTTTGTAGACGCAATGTTCTTGATCCACAAGGTCCACTACTTCAAAAATGGAACAAGATCTTTGTCATAACGTGTGTGATGGCGATATCAATGGACCCGTTGTTCTTTTACATACCTGTGATTGATGAGAAGAGAAAATGTCTTAAATTGGATGGAACATTGAAGGTTACTGCTGGTGTTCTTCGCACATTCTTCGATCTTTTCTACATTCTTCGCATTGTTTTTCAGTTTCGAACCGGGTTTATTGCCCCTTCTTCGCGTGTATTCGGAAGGGGCGAACCGGTTGATGATCCTTTTGCTATAGCCATGAGATACTTAAGTTCTCACTTCATCATTGATATTCTATCAATTCTTCCACTTCCTCAGATGGTAATGTTAGCTATGATTCCAATTCCACAACGCTCAGTTCCATGTATAGCAAAGGATTGGTTGAAGTATATGATAATAGCGCAGTATGCGCCGAGACTATTGCGAATCTATCCATTGTTCAAAGAAGTAACAAACACTTCTGGTATATTGACTGAGACAGCATGGGCTGGAGCTGCTTATAATCTTTTTCTTTATATGCTAGCAAGTCATGTTGTTGGAGCTTTTTGGTACTTGTTTTCGATAGAATCGCAGTTGCGCTGTTGGCATCGACAATTGAAGCATACTGCATTCTCTGATGATTCATATTTGAGCTGTGGACGACGAGTTAATTCAAGTGTTTTATCGCTTCTCAACAATGCTACTACTTGTCCTTACACTGATCCTGATGAAATCATTGATCCAATGGTTTTCAATTTTGGAATATTCATCGATGGTCTTAAGTCTCGTGTGGTTGAATCTAGAACTAATTTGCATCATAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTGTTGGACAGAACTTGAAGACAAGCACTTATATTGGAGAGATAATATTTGCAATATTCATAGCAGTGTTTGGATTGGTGCTATTTGCATTACTTATTGGAAATATGCAGAAATATCTACAATCTACAACAGTTAGAGTTGAAGAGATGAGAATAAAAAGGAGGGATGCAGAACAATGGATGTGCCATAGAATGCTACCGGAGTACTTAAAGCAAAGAATTAGAAGATATGAACAATACAAATGGCAAGAAAATCGCGGTGTTGAAGAGGAGACATTAATTCGGAACCTCCCTAAAGATCTAAGAAGAGACATAAAGAGACATCTTTGCTTAGATTTACTTAAAAAAGTGCCAATATTTGGAAACATGGATAAACAATTGTTGGATGCAATGTGTGATAAATTGAAGCCAGTACTTTATACTGAAAAAAGTTATGTTGTTTGCGAAGGCGATCCAGTGGACGAAATGCTCTTCATAATGCGAGGAAAACTCGCTACTGTCAGCACCAATGGTGGAAGAACTGGTTTCTTTAACTCGTCTGAGCTTAAAGCTGGCGATTTTTGTGGAGAGGAGCTTCTAACATGGGCCTTGTATCCTACACCTTCTTCAAACTTGCCTATTTCAACTAGCACAGTTCAAACTATTTCAGAAGTTGAAGCTTTTGCTCTTTTGCCTGATGATTTGAAGATTGTTGCTTCCCAATTTCGCCGTCTTATTAACACAAAACAACTCAAACACACTTTCAGATTCTCTTCCTGGAAATGGAGGACATGGGGAGCGCGATTCATACAAGTAGTTTGGCGTAGAAACAGGGAAAAAAGGGCTCAGAAATCGTTACGTGAAGCAGAAGAAAAACAACAACATGGTTCTCAAAATGATGAAGAAGGATCCTCACCAAGCTTTGCTACCACCGTATATGTACAAAGGTTTGCATCCAATGCATTAAGGCATTTGAGAAGTGGCAAGAAAATGCCACAACCAAAGAGAATGCTTCCACTCTTGCCTATGAAACCAGCTGAGCCAGATTTCCTCACTAAAAAAAACTATGATTAA 2100 0.3795 MSSKEKKFVRFEDWKSESSSFNIEKYDSSIDGLEKRKVRSSLSPANNESEKKSVCRRNVLDPQGPLLQKWNKIFVITCVMAISMDPLFFYIPVIDEKRKCLKLDGTLKVTAGVLRTFFDLFYILRIVFQFRTGFIAPSSRVFGRGEPVDDPFAIAMRYLSSHFIIDILSILPLPQMVMLAMIPIPQRSVPCIAKDWLKYMIIAQYAPRLLRIYPLFKEVTNTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSIESQLRCWHRQLKHTAFSDDSYLSCGRRVNSSVLSLLNNATTCPYTDPDEIIDPMVFNFGIFIDGLKSRVVESRTNLHHKFFYCFWWGLRNLSSVGQNLKTSTYIGEIIFAIFIAVFGLVLFALLIGNMQKYLQSTTVRVEEMRIKRRDAEQWMCHRMLPEYLKQRIRRYEQYKWQENRGVEEETLIRNLPKDLRRDIKRHLCLDLLKKVPIFGNMDKQLLDAMCDKLKPVLYTEKSYVVCEGDPVDEMLFIMRGKLATVSTNGGRTGFFNSSELKAGDFCGEELLTWALYPTPSSNLPISTSTVQTISEVEAFALLPDDLKIVASQFRRLINTKQLKHTFRFSSWKWRTWGARFIQVVWRRNREKRAQKSLREAEEKQQHGSQNDEEGSSPSFATTVYVQRFASNALRHLRSGKKMPQPKRMLPLLPMKPAEPDFLTKKNYD 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02932 699 Gene3D Jelly Rolls 466 586 IPR014710 -
Car07g02932 699 SUPERFAMILY cAMP-binding domain-like 397 584 IPR018490 -
Car07g02932 699 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 695 - -
Car07g02932 699 SMART cnmp_10 468 599 IPR000595 -
Car07g02932 699 SUPERFAMILY Voltage-gated potassium channels 61 390 - -
Car07g02932 699 Gene3D - 72 392 - -
Car07g02932 699 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 7 695 - -
Car07g02932 699 MobiDBLite consensus disorder prediction 626 648 - -
Car07g02932 699 Gene3D Helix hairpin bin 395 459 - -
Car07g02932 699 Pfam Ion transport protein 70 396 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car07g02932 699 ProSiteProfiles cAMP/cGMP binding motif profile. 468 572 IPR000595 -
Car07g02932 699 MobiDBLite consensus disorder prediction 626 640 - -
Car07g02932 699 CDD CAP_ED 468 588 IPR000595 -
Car07g02932 699 MobiDBLite consensus disorder prediction 666 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02932 Car-Chr7 55821438 55825385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02932 47 699 Ion Channels AT1G01340 62.085 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02932 K05391 - gmx:100795201 1038.1