Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02930 ATGGAAAGGCTTCAAGGACCCATCAATTCTTGTTTCTTTGGTGAAGTGAATTATTTGGACCAAACATTACTTGATGTAGAAAACTTAAGATTTGAAGAGGAAGAACAAGAACAATTTCTCATATCAAGTttagaagacaacatgccatttcttcaaatgcttcaaagtgttgagtctccaaattttttccctttgaaagaaccAAACTTTCAAACACTTTTGAGGCTACAACAACAAATGAAGAAACCATGGGAAGATAATACACAAGTTCAAACAGCATTGGAATTTGAAAGCTGTGTAACACATGACATGTTAGAGATGCAATACTCACCAGTTAAATCAGAAAGCAATGAACTTCAAAACAAAATTTCAGCTTCATGCATTGAGAAATTGAGCTATGAGTGTAACCAAAAAGAACCAGCAAAAACACCACAAACATGTCTCAAATCTCAAACAACAAGGGAAAAGAGAAAGAGAAAGAGAACAAGACCAATTAAGAACAAGGAAGATGTTGAGAATCAACGTATGACACATATTGCTGTTGAAAGAAACAGAAGACGCCAAATGAATGACCATCTTAGTGTTCTTAGGTCCCTCATGCCACCTTCATATATTCAAAGGGGTGACCAAGCATCAATAATAGGAGGTGCAATAGATTTTGTGaaagagttagagcaattgcttgaatcccttgaagcacaaaaaagGATAAAAAAGAATGATGAAGAGGTTAGTTATTCAAGTAGTTTGTCAAAACCATCTTCATCAACAGATAGTTATGGAATGAAGTTATCATCTTCTGAAGAAAATGAAGTGAAGGCGGAAAACAAGTCAGAAGCAGCAGATATAAAAGTCACATTGATTCAAACTCATGTGAACTTGAAAATTGAGTGTAAAAAAAGACAAGGACAATTGATAAAAGTTATTGTTGCTTTGGAAAATCTTAGGCTAACTATTCTTCACCTTAACATCACATCTTCTGAGTCTTCTGTCTTCTACTCCCTAAATCTCAAGATTGAAGAAGAGTGTAAGCTAGGCTCAGCAAATGACATAGCAGAAGCAGTTCATGAAATATTCAGCTATATTAATGGCAGCTAA 1098 0.3115 MERLQGPINSCFFGEVNYLDQTLLDVENLRFEEEEQEQFLISSLEDNMPFLQMLQSVESPNFFPLKEPNFQTLLRLQQQMKKPWEDNTQVQTALEFESCVTHDMLEMQYSPVKSESNELQNKISASCIEKLSYECNQKEPAKTPQTCLKSQTTREKRKRKRTRPIKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLLESLEAQKRIKKNDEEVSYSSSLSKPSSSTDSYGMKLSSSEENEVKAENKSEAADIKVTLIQTHVNLKIECKKRQGQLIKVIVALENLRLTILHLNITSSESSVFYSLNLKIEEECKLGSANDIAEAVHEIFSYINGS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02930 365 Coils Coil 221 244 - -
Car07g02930 365 MobiDBLite consensus disorder prediction 142 169 - -
Car07g02930 365 Gene3D - 164 241 IPR036638 GO:0046983
Car07g02930 365 SMART finulus 179 230 IPR011598 GO:0046983
Car07g02930 365 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 224 IPR011598 GO:0046983
Car07g02930 365 Pfam Helix-loop-helix DNA-binding domain 174 225 IPR011598 GO:0046983
Car07g02930 365 MobiDBLite consensus disorder prediction 246 266 - -
Car07g02930 365 PANTHER MAX DIMERIZATION, MAD 18 364 - -
Car07g02930 365 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 238 IPR036638 GO:0046983
Car07g02930 365 MobiDBLite consensus disorder prediction 242 275 - -
Car07g02930 365 PANTHER TRANSCRIPTION FACTOR BHLH70 18 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02930 Car-Chr7 55786276 55789659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02930 33 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 46.726 5.06e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car07g02930 HLH 3.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02930 - - gmx:100789928 524.628