Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02924 ATGTCGGTGGGAGAGGTTGCTTGCAGCTACTCGCTTATGATCCTTCATGATGAACAAATCCCTGTCACTGGTGACAAAATCTCAACTTTGTTGAAAGCTGCAAAGGTTGATGTTGAATCTTATTGGCCAAGCTTGTTTGCTAAACTTGCCGAGAAGAAAAACCTTGAGGAGTTGATATTGAATGCCACAGGAGGTGGGGCTCCGGTTTCTGTTTCAGCCCCAGTtgctgctgctgccgcaactgcagttgctgcacctgcAGAAGAGAAGAAGGAAGAACCCAAGGAAGAGAGTGACGACGACATGGGATTCAGCTTGTTTGATTAG 327 0.4037 MSVGEVACSYSLMILHDEQIPVTGDKISTLLKAAKVDVESYWPSLFAKLAEKKNLEELILNATGGGAPVSVSAPVAAAAATAVAAPAEEKKEEPKEESDDDMGFSLFD 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02924 108 MobiDBLite consensus disorder prediction 86 102 - -
Car07g02924 108 Pfam 60s Acidic ribosomal protein 22 107 - -
Car07g02924 108 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 100 - -
Car07g02924 108 MobiDBLite consensus disorder prediction 83 108 - -
Car07g02924 108 CDD Ribosomal_P1 5 107 - -
Car07g02924 108 Gene3D - 1 62 IPR038716 -
Car07g02924 108 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN 1 100 - -
Car07g02924 108 Hamap 50S ribosomal protein L12 [rpl12]. 6 108 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02924 Car-Chr7 55657493 55659117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02924 1 108 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 53.982 6.87e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02924 K02942 - zju:107423779 129.798