Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02920 ATGCCTGAAAACATGAGCATATCTGTTAATGGACAATCTCAAGTTCCACCTGGATTCAGGTTTCATCCAACTGAAGAAGAGCTTTTACAATACTATTTAAGGAAAAAAGTCTCTTATGAGAAGATCGACCTTGATGTTATTCGTGATGTTGATCTCAATAAGCTTGAACCATGGGATATACAAGAGAAATGCAAAATAGGTACAACTCCACAAAATGATTGGTACTTCTTTAGCCACAAAGATAAGAAGTATCCAACCGGAACGCGAACGAATCGCGCCACGGCTGTTGGTTTCTGGAAAGCCACCGGTCGGGACAAAGTTATATATAGTAATGGAAAAAGAATTGGAATGAGAAAAACTTTGGTTTTCTATAAAGGTCGCGCCCCTCATGGCCAAAAGTCGGATTGGATCATGCATGAATACCGACTAGATGATAACACCACCAACGACACCAATCTGGTGTCAAATGTGATTGGTGATGGTGGTCAAGAAGAAGGATGGGTGGTGTGTAGGATATTCAAGAAGAAGAATCATCTCAAAACCCTAGATAGCCCATTAGGGTCATCAATTTCTGGAGATGGAAGAAGAAACCACCTCATGTATGATCCTTGTGATGATGAGGGAGCTTTAGAGCAAATACTTCGACAAATGGGAAGAGGTTGCAAAGAAGAGAATTATGAAGCAAATTGCAATAATAATTATGAAAGGTTTGCAAGACCTTTTGACCACACTAACCTCAACAACATGAATGGTGGTAATTATAATAATGAAAGGTTCATGAAACTTCCAAGTTTAGAGAGTCCAAAATCAACAAGCATGGAGAACAATGAGAACAACAATAATAATGGGTACCATGCAATTATTCAAGAAAATGAAGGGTCATTCACTAATAACCATAACAACATGGTGAATCCATTAGAGACATCATCATCATCAACACAAATGGTTAGTGGCCTCACTAATTGGGTAGCTTTGGATAGACTTGTTGCTTCTCAACTCAATGGACAAACTGAGGCTACTAGACAATTGGCTTGTTTCAATGACCCCACTATTGGATATTGCACTAATGATCATCATGATCTTCAATTTCCAACCCTTAGatcatcatcatcaacttcatcaatatcaATACATGCTAAAGCAACAACTTCAACTACTACTTCTACTTACATTACTCCCTCACAAGACTATACTAGTGAGATTGACCTTTGGAACTTTGCTCGATCAACTTCATCCTTGTTGTCATCTTCTGAACCAATATGCCACGTGTCTAACACATCAGTGTAA 1287 0.3792 MPENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAVGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTNDTNLVSNVIGDGGQEEGWVVCRIFKKKNHLKTLDSPLGSSISGDGRRNHLMYDPCDDEGALEQILRQMGRGCKEENYEANCNNNYERFARPFDHTNLNNMNGGNYNNERFMKLPSLESPKSTSMENNENNNNNGYHAIIQENEGSFTNNHNNMVNPLETSSSSTQMVSGLTNWVALDRLVASQLNGQTEATRQLACFNDPTIGYCTNDHHDLQFPTLRSSSSTSSISIHAKATTSTTTSTYITPSQDYTSEIDLWNFARSTSSLLSSSEPICHVSNTSV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02920 428 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Car07g02920 428 SUPERFAMILY NAC domain 9 175 IPR036093 GO:0003677|GO:0006355
Car07g02920 428 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 374 - -
Car07g02920 428 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Car07g02920 428 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Car07g02920 428 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 8 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02920 Car-Chr7 55528216 55530166 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02920 1 427 NAC Transcription Factor Family AT2G46770 53.917 4.12e-143 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car07g02920 NAM 6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02920 - - ahf:112734309 599.742