Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02919 ATGCCTGAAAACATGAGCATATCTGTTAATGGACAATCTCAAGTTCCTCCTGGATTCAGGTTTCATCCAACTGAAGAAGAGCTTCTACAATACTATTTAAGGAAAAAAGTTTCTTATGAGAAGATTGACCTTGATGTTATTCGTGATGTTGATCTCAATAAGCTTGAACCATGGGATATACAAGAGAAATGCAAAATAGGAACAACTCCACAAAATGATTGGTACTTCTTTAGCCACAAAGACAAGAAATATCCAACCGGAACTCGAACAAATCGCGCCACGGCTGCTGGTTTCTGGAAAGCCACCGGTCGAGACAAAGTTATATATAGTAATGGAAAAAGAATTGGAATGAGAAAAACTTTGGTTTTCTACAAAGGTCGCGCCCCTCATGGCCAAAAATCGGATTGGATTATGCATGAATACCGACTAGACGATAACACCACAAATGACACCAATTTGGTGTCGAATATGATTGGTGATGGTGGTCAAGAAGAAGGATGGGTGGTGTGTAGGATATTCAAGAAGAAGAATCATCTAAAAACCCTAGATAGCCCATTAGGATCGTCAATTTCTGGTGATGGAAGAAGTCACCCCATGTATGATCCTTGTGATGATGAGGGAGCTTTAGAGCAAATACTTCGACAAATGGGAAGAGGTTGCAAAGAAGAGAATTATGAAGCAAATTGCAATAATAATTATGGAAGGTTTGCAAGACCTTTTGATCACACTAACCTCAACAACATGAATGGTGGTAATTATAATAATGAAAGGTTCATGAAACTTCCAAGTTTAGAGAGTCCAAAATCAACAAGCATGGAGAACAATGAGAACAACAATAATAATGGGTACCATGCAATTATTCAAGAAAATGAAGGGTCATTCACTAATAACCATAACAACATGGTGAATCCATTAGAGACATCATCATCATCAACACAAATGGTTAGTGGCCTCACTAATTGGGTAGCTTTGGATAGACTTGTTGCTTCTCAACTCAATGGACAAACTGAGGCTACTAGACAATTGGCTTGTTTCAATGACCCCACTATTGGATATTGCACTAATGATCATCATGATCTTCAATTTCCAACCCTTAGatcatcatcatcaacttcatcaATATCTATACATGCTAAAGCAACAACTTCAACTACTACTTCTACTTACATTACTCCCTCACAAGACTATACTAGTGAGATTGACCTTTGGAACTTTGCTCGATCAACTTCATCCTTGTTGTCATCTTCTGAACCAATATGCCACGTGTCTAACACATCAGTGTaa 1284 0.3754 MPENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTNDTNLVSNMIGDGGQEEGWVVCRIFKKKNHLKTLDSPLGSSISGDGRSHPMYDPCDDEGALEQILRQMGRGCKEENYEANCNNNYGRFARPFDHTNLNNMNGGNYNNERFMKLPSLESPKSTSMENNENNNNNGYHAIIQENEGSFTNNHNNMVNPLETSSSSTQMVSGLTNWVALDRLVASQLNGQTEATRQLACFNDPTIGYCTNDHHDLQFPTLRSSSSTSSISIHAKATTSTTTSTYITPSQDYTSEIDLWNFARSTSSLLSSSEPICHVSNTSV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02919 427 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Car07g02919 427 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 8 373 - -
Car07g02919 427 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Car07g02919 427 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 373 - -
Car07g02919 427 SUPERFAMILY NAC domain 9 175 IPR036093 GO:0003677|GO:0006355
Car07g02919 427 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02919 Car-Chr7 55512319 55513949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02919 1 426 NAC Transcription Factor Family AT2G46770 54.147 2.80e-142 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car07g02919 NAM 4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02919 - - ahf:112734309 592.808