Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02918 ATGTCTCAACAAAGACAACCTCAAATGGTGAGTGTTAACAACAACCAAGACCAATATAATGACACAACATTTACCAAAATTTTTGTTGGAGGGTTAGCTTGGGAGACACAAAGGGACACAATGAGAATGTATTTTGAGCAATTTGGAGAGATCTTAGAAGCTGTTGTTATCACAGATAAGTACACTGGGAGATACAAAGGTTATGGTTTTGTCACATTTAAGGATCCAGAAGCAGCTATAAGAGCATGTCAGAATCCATCTCCAGTAATTGATGGTAGGAGAGCAAATTGCAATATTGCTTCTCTTGGTGCAAACAAAAATAGACCACTAACTCTTCACCATGGAAGGTTTAGGCCAGCACATGGAGTGGTAGCATCAGTTCCTTATAATGGTTCTTCATCTACAATTTTCAATCAACCTACTAGACAATATACATTTCCTTATTCAGCTTATGGATATTCTGGATATTCACACGATACCTTGTATCCTCCGGGGTATTACAATGTGTATGGAGTTCAACAAATGTCACCTTACTACCCATCTGCTGGGGCAATGGGGTTGGTCCAAAATATGTACCCTTTCTATGGGCAATATGCACAAAATATCCAAAGTCATGGTTTTGGAATTCAATACCCCCAAATTACACAGATTCCAATTTTGCCTCAGCAATATGGTTCCACAGGAATATTGTCATTTCCTTCTTCAGTAGCAATGCCAACCACTAGTGCAGTAACGGTAATTGCACCAACAACTAGTACAATATCAACAGTTGTGGAAGTAACAGAGGTTGATAATTCACAAGCTTCTGGAACATCTTCTGAACAACAACATTCTACATCTTGA 843 0.3867 MSQQRQPQMVSVNNNQDQYNDTTFTKIFVGGLAWETQRDTMRMYFEQFGEILEAVVITDKYTGRYKGYGFVTFKDPEAAIRACQNPSPVIDGRRANCNIASLGANKNRPLTLHHGRFRPAHGVVASVPYNGSSSTIFNQPTRQYTFPYSAYGYSGYSHDTLYPPGYYNVYGVQQMSPYYPSAGAMGLVQNMYPFYGQYAQNIQSHGFGIQYPQITQIPILPQQYGSTGILSFPSSVAMPTTSAVTVIAPTTSTISTVVEVTEVDNSQASGTSSEQQHSTS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02918 280 SMART rrm1_1 26 98 IPR000504 GO:0003723
Car07g02918 280 PANTHER BOULE-RELATED 1 262 IPR037366 GO:0003729
Car07g02918 280 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 84 IPR000504 GO:0003723
Car07g02918 280 CDD RRM_RBM24_RBM38_like 25 100 - -
Car07g02918 280 PANTHER - 1 262 - -
Car07g02918 280 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 117 IPR000504 GO:0003723
Car07g02918 280 SUPERFAMILY RNA-binding domain, RBD 6 107 IPR035979 GO:0003676
Car07g02918 280 Gene3D - 1 110 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02918 Car-Chr7 55458663 55461588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02918 21 101 C2H2 Transcription Factor Family AT2G19380 43.210 4.50e-15 73.2