Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02917 ATGGGGAAGAAAGGAAGTAGTTCATGGTTAAATGCTGTTAAAAGAGCATTCAGATCTCCAACAAAAGATAGTGACAAAAAAAGTGGTagaagaagagaagattgtgatcaagaagaagatgaagaaaagAAGAGAGAAAAAAGAAGGTGGATTTTTAGAAAACCTGTGAGTCATGAAACAGTGAACAACAACAGTGCACAAAGTACAACAACACCAACAAAGTTGAAGAATGATGTTGTGGTTACTGCTACAAGTGGAGTTTCAAGGACAGATCAAGATCAAAAACATGCTCTTGCTGTTGCTATGGCTACTGCTGAGGCAGCAAGAGCCACTGCTCAAGCTGCTGTTGAAGTTGCAAGGTTGACTAAGCCTTCAAATCATGCTAGGGAGCATTTTGCTGCTGTTGTTATTCAAACTTCTTTCAGAGGTTATTTGGCTAGAAGAGCACTTCGTGCACTTAAGGGTTTGGTAAAGTTGCAAGCTTTAGTGAGAGGACACAATGTTAGAAAACAAGCAAAGATGACACTTAGGTGCATGCAAGCTCTTGTTAGAGTACAAGCAAGAGTTCTTGACCAACGTGTAAGATCTTCTTCACATGAAGGAAGTAGAAAATCAACCTTTAGTGACACTACTAGTGTTTGGGATTCGCGGTATCTTCAAGACATTTCGGATAGGAAATCAATGTCAAGAGAAGGAAGTAGTGTTGCAGATGATTGGGATGAACGTCCACATACAGTTGAAGAAGTTAAGGCCATGTTGCAACAAAGGAAGGAAGCTGCTATGAAGAGGGAAAAGTCATTGTCTCAAGCTTTTTCACAACAGATTTGGAGAAATGGAAGGACATCATCAATAGGAAATGAAGATGAACTTGAGGAGAGACCAAAATGGTTAGATAGATGGATGGCTACAAAGCCATGGGAGAATAGAGGAAGAGCTTCAACTGATCAAAGAGACCCCATTAAGACTGTTGAAATTGACACATCTCAACCTTATTCATATCTAGGAACCAATTACAGAAGATCACATCCAAATTATCAATACAATCCACACCACCAACCCCAAAGACATTCCATTGCTTCACCACTCCATAGAACACACCAAAATGGATCCATTCACCAATCCGTCACTACTCCATCTCCATCAAAATCGAGACCTATCCAAGTCCGATCATCGAGTCCACGATGTGTTAGAGAAGATAGAAGCTACCACACTTCTCAAACACCAAGCTTGAGGTCTAATTACCATTACAATGGTAACTTGTATCAAAATAGTAGGGTAGGAACAAGTAACAGTGCTGCTACTACTGCTGCTACTACTACATTGCCTAATTACATGCAAGCAACTGAGTCTGCGAAGGCTCGAATTAGATCGCAGAGTGCGCCAAGGCAAAGGCCATCGACTCCGGAGAGGGATAGAGCTGGATCTGTAAAGAAAAGGCTCTCTTTCCCCGCTCCGGATCCTTATAATGTTGGAGGAGTTAGTTATGGAAATTATGGACATAGTTTAAGGAGTCCAAGTTTCAAGAGTGTGAATGTAGTATCACATTTTGGTTTGGAGCAACAATCCAATTACTCTTCTTGTTGTACCGAGAGTCTCGGTGGCGAGGTTTCGCCTTCTTCAACCGGAGACCTTAGAAGGTGGTTGAGATAA 1650 0.4048 MGKKGSSSWLNAVKRAFRSPTKDSDKKSGRRREDCDQEEDEEKKREKRRWIFRKPVSHETVNNNSAQSTTTPTKLKNDVVVTATSGVSRTDQDQKHALAVAMATAEAARATAQAAVEVARLTKPSNHAREHFAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVRSSSHEGSRKSTFSDTTSVWDSRYLQDISDRKSMSREGSSVADDWDERPHTVEEVKAMLQQRKEAAMKREKSLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPHHQPQRHSIASPLHRTHQNGSIHQSVTTPSPSKSRPIQVRSSSPRCVREDRSYHTSQTPSLRSNYHYNGNLYQNSRVGTSNSAATTAATTTLPNYMQATESAKARIRSQSAPRQRPSTPERDRAGSVKKRLSFPAPDPYNVGGVSYGNYGHSLRSPSFKSVNVVSHFGLEQQSNYSSCCTESLGGEVSPSSTGDLRRWLR 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02917 549 MobiDBLite consensus disorder prediction 18 55 - -
Car07g02917 549 ProSiteProfiles IQ motif profile. 154 181 IPR000048 GO:0005515
Car07g02917 549 MobiDBLite consensus disorder prediction 363 390 - -
Car07g02917 549 Pfam Protein of unknown function (DUF4005) 392 496 IPR025064 -
Car07g02917 549 MobiDBLite consensus disorder prediction 57 76 - -
Car07g02917 549 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 549 - -
Car07g02917 549 MobiDBLite consensus disorder prediction 527 549 - -
Car07g02917 549 Gene3D - 127 195 - -
Car07g02917 549 MobiDBLite consensus disorder prediction 450 486 - -
Car07g02917 549 PANTHER IQ-DOMAIN 5-RELATED 1 549 - -
Car07g02917 549 MobiDBLite consensus disorder prediction 450 464 - -
Car07g02917 549 SMART iq_5 129 151 IPR000048 GO:0005515
Car07g02917 549 SMART iq_5 152 173 IPR000048 GO:0005515
Car07g02917 549 MobiDBLite consensus disorder prediction 363 415 - -
Car07g02917 549 ProSiteProfiles IQ motif profile. 130 158 IPR000048 GO:0005515
Car07g02917 549 MobiDBLite consensus disorder prediction 1 76 - -
Car07g02917 549 Pfam IQ calmodulin-binding motif 157 173 IPR000048 GO:0005515
Car07g02917 549 Pfam IQ calmodulin-binding motif 133 151 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02917 Car-Chr7 55443101 55446900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02917 1 549 IQD Protein Family AT1G01110 57.544 1.05e-179 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02917 - - gmx:100799284 847.04