Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02912 ATGGAAGGTTTCATCATCTCACCTTCTTCATCCTCTTCTATGATATCATTTCCCCATGAAAAAAACCCTTcaccgtcaccaccaccaccacaaataccaACCCTTGAACAAAAACTTCAATTTTTACTCCAAGCCCAACCAAACCATTGGGTCTACGCCATATTTTGGCAAACAACAAAAGACGAAAGAGATAACATCTTCTTAACATGGGGTGAAGGTCATTTCCATGACACAAAAGAAACAACAACAACTTCTTCCGAAACAGTAAACGACAATGACACGTGTACAAACGGCGATGCTTTGTTGTTCTACATTATGTCGTTGAGTCGAACGTTTTCCGTTGGTAATTCTTCTTCAAATTCTTTACCCGGTAAAGCTTTTGCTTTAAATTCAGTTCTTTGGTTGAATAGCAAACACGAGCTTCAATTTTATAATTGTGATAGATCCAATGAAGCTCACGTGCATGGAATCGAAACCTTAATTTGTATTCCGACAACTAACGGAGTAATCGAAATGGGTTCTTACGAAAATATCCAACAAAATTGGAACCTCGTACACCAAGCCAAATCAATGTTCCAAACATCATTGTCCGAATCAAACTCAAAATTAGATCTATTTTCCACCGACCCACTTGACAGAATCAAAACTTTCGACCAAAACATCTTGTTCACCGACGTGGGTATCATCTCCGGCACCGGCGAAGAAACCGATGAGATGCAAAAAATGATGAACAGAACATGGCTACAAAAACCGAAAACCGTTTCATCTTGTTATGTAGATTCTGAATATTCCGATTCAGAATATTATCCACAGTTAGAAACAAAAAAAAATGATTCTTTTGAGAAAAGAGAACCGAAGAAAAGAGGAAGAAAACCATTACTGGGAAATCCAACACCAATGAGTCATGTAGAAGCTGAGAGACAGAGGAGAGAAAAAATAAACCATAGATTCTATGCTTTAAGAGCTGTGGTTCCAAATGTTTCAAGGATGGATAAAGCCTCTTTGTTATCAGATGCAGTTGATTTCATCAACGAGTTGAAATCAAAGATTGTAGAGTTGGAATTAGAGCAACAAAAGGAGTTAAAAAAATTGAAAATTGAAAATATGGATAATCAAAGTACAGCGACGACTTCAACTGTGGTGGACCAAAAAAGAATAAGTTGTAATAATATTTCTTTGGAGATTGATGTGAAGATTATTGGAGGTGATGCTATGGTGAGAGTTCAATGTGAGAATGTTAATCACCCTGGTGCTAGATTAATGAGTGTGTTGAAGGACTTGGAATTTCAGGTACATCATGCTAGTATTTCTTGTGTTAATGAAATTATGGTTCAAGATGTTGTTGTTCAAGTTCCTATTAATATGAGAAATGAAGAGAGACTAAGATCTGCAATTCTCATGAGATTGGATCAAGAATGA 1419 0.3566 MEGFIISPSSSSSMISFPHEKNPSPSPPPPQIPTLEQKLQFLLQAQPNHWVYAIFWQTTKDERDNIFLTWGEGHFHDTKETTTTSSETVNDNDTCTNGDALLFYIMSLSRTFSVGNSSSNSLPGKAFALNSVLWLNSKHELQFYNCDRSNEAHVHGIETLICIPTTNGVIEMGSYENIQQNWNLVHQAKSMFQTSLSESNSKLDLFSTDPLDRIKTFDQNILFTDVGIISGTGEETDEMQKMMNRTWLQKPKTVSSCYVDSEYSDSEYYPQLETKKNDSFEKREPKKRGRKPLLGNPTPMSHVEAERQRREKINHRFYALRAVVPNVSRMDKASLLSDAVDFINELKSKIVELELEQQKELKKLKIENMDNQSTATTSTVVDQKRISCNNISLEIDVKIIGGDAMVRVQCENVNHPGARLMSVLKDLEFQVHHASISCVNEIMVQDVVVQVPINMRNEERLRSAILMRLDQE 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02912 472 PANTHER TRANSCRIPTION FACTOR BHLH14 1 469 - -
Car07g02912 472 PANTHER MYC 1 469 IPR045084 GO:0003700|GO:0006355
Car07g02912 472 MobiDBLite consensus disorder prediction 1 20 - -
Car07g02912 472 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 35 192 IPR025610 -
Car07g02912 472 MobiDBLite consensus disorder prediction 274 308 - -
Car07g02912 472 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 297 346 IPR011598 GO:0046983
Car07g02912 472 Coils Coil 336 372 - -
Car07g02912 472 Pfam Helix-loop-helix DNA-binding domain 301 346 IPR011598 GO:0046983
Car07g02912 472 MobiDBLite consensus disorder prediction 1 31 - -
Car07g02912 472 MobiDBLite consensus disorder prediction 274 291 - -
Car07g02912 472 Gene3D - 280 348 IPR036638 GO:0046983
Car07g02912 472 SMART finulus 303 352 IPR011598 GO:0046983
Car07g02912 472 CDD ACT_UUR-ACR-like 414 469 - -
Car07g02912 472 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 299 357 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02912 Car-Chr7 55338748 55340652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02912 35 471 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 30.885 1.76e-81 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car07g02912 bHLH-MYC_N 8.6e-42 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02912 - K13422 gmx:100795733 489.574