Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02898 ATGCACATGAAAGTTCCAATGGAGGAAAAGCCATTCCCTGCATGGTCATGGTCTGTTGAGCAGTGCTTGAAAGAGTATGATGTGAAACTAGACAAGGGTTTGAATTCTAATGAGGTTCTGAAGCGGCGAGAGAAATACGGTTGGAATGAGCTAGCAAAAGAGAAGGGAAAGCCGTTATGGAAACTAGTGTTAGAACAATTTGACGACATGTTGGTGAAGATACTTTTGGTTGCAGCTTTTGTATCGTTTCTTTTGGCATACTTTGAAGGAAGTGAATCCGGAGAATCTGGATTCGAAGCTTATGTCGAGCCGCTTGTGATCGTTTTGATCTTAGTCCTTAACGCGATTGTTGGAGTTTGGCAAGAGAACAATGCTGAAAAGGCTCTTGAAGCTCTTAAAGAGTTGCAATGTGAATCTGGAAAAGTGTTGAGGGACGGATATTTTGTTCCTGATTTGCCTGCTCGCGAGCTTGTACCCGGCGACATTGTGGAATTACGCGTTGGAGATAAAGTCCCTGCTGACATGAGAGTTGCAGTTTTGAAAACCTCGACATTGAGAGTGGAACAAAGCTCGTTAACAGGCGAAGCAATGCCGGTTCTCAAAGGAACCAATCCTATTTTCTTGGATGATTGTGAATTGCAGGCCAAAGAAAACATGGTGTTTGCAGGCACAACTGTTGTCAATGGAAGCTGTATTTGCATTGTGATTACAACAGCAATGAACACCGAAATTGGAAAGATACAGAAGCAAATACACGAGGCTTCGTTCGAGGATACCGATACTCCTTTGAAGAAGAAGTTGGATGAGTTTGGTGGAAGGCTTACAACTTCAATTGGGATAGTTTGTCTTGTTGTTTGGATCATAAACTACAAAAACTTCATTTCTTGGGATATTGTTGATGGAAGGCCTTCAAATATTCAATTTTCTTTTCAGAAATGCACTTACTATTTCAAAATTGCTGTTGCACTTGCCGTGGCTGCAATTCCAGAAGGTCTTCCAGCTGTTATCACGACATGTTTAGCACTCGGTACGAGGAAAATGGCACAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTTGAAACTTTAGGATGTACTACCGTGATTTGTTCGGATAAAACCGGTACATTGACAACAAATCAAATGTCTGTGACAGAGTTCTTTACTTTAGGTGGAAAAACCACTGCTTCTAGAGTGATTAGAGTTGAAGGGACAACTTATGATCCAAAAGATGGAGGCATTGTTGATTGGACTTGCTATAACATGGATGCTAATATGTTAGCCATGGCAGAAATATGTGCTGTTTGTAACGATGCTGGTGTTTATTTCGACGGTCGCTTATTTCGAGCCACAGGTTTGCCTACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAGATGGGGTTTCCAGATATCAAGTCGAGGAACAAAACTCGCGATGCACAAGTTGCTTGTAACAACATGATGGATTGCAACAGTTTGAAGCTAGGTTGTTGTGAGTGGTGGAATAGAAGATCCAAAAGGGTAGCTACATTGGAGTTTGACCGTGTTAGGAAGTCAATGAGCGTTATTGTTCGCGAATCAGATGGACAAAATCGGCTTCTTGTCAAGGGTGCTGTTGAGAGTTTACTTGATCGGTGTTCATACGTGCAACTTGCTGATGAATCGCTGGTTCCAATAGATGATCAATGTAAGGAACTACTTCTTCAAAGACTCCACGGAATGAGTTCGAAGGGATTGCGTTGCTTGGGTTTGGCGTTTAAAGATGAGTTGGGAGAGTTTTCAGACTATTATGCAGACACTCATCCTGCTCACAAGAAGTTGCTTGATCCAACATACTATTCATCCATTGAAAGTGATTTAGTTTTTGTTGGTGTTGTTGGTTTAAGAGACCCTCCTAGAGAAGAAGTTCACAAAGCAATTGAGGATTGTAAGCAAGCTGGTATTAGAGTTATGGTAATAACTGGAGATAATAAGTCAACAGCTGAGGCTATTTGCAAGGAAATCAAATTGTTCTCTAGAGATGAAGATCTTACAGGTCAAAGTTTGACAGGTAAAGAATTCATGTCGCTTTCTCATTCAGAACAAGTTAAACTATTGTTGAGACATGGAGGCAAGGTTTTCTCGCGAGCCGAGCCGAGACACAAGCAAGAAATTGTGAGACTACTTAAGGAAATGGGGGAAATTGTTGCAATGACTGGAGATGGTGTGAATGATGCACCTGCCCTTAAGCTTGCTGACATAGGGATTGCTATGGGAATAACTGGAACAGAGGTTGCAAAAGAAGCTTCAGATATGGTACTTGCAGATGACAATTTTAGTACCATAGTTTCAGCTATTGCCGAGGGCCGCGCTATTTATAACAACATGAAAGCATTTATAAGGTACATGATATCATCAAATGTTGGGGAAGTAATATCCATATTCTTGACAGCTGCTTTGGGGATCCCAGAATGTATGATACCAGTACAACTTCTGTGGGTGAATTTGGTCACTGATGGTCCACCTGCAACAGCTCTTGGTTTCAACCCTGCTGATGTTGATATCATGCAGAAACCACCTCGAAGAAGCGATGATGCACTTATAAGTACTTGGGTTCTTTTTCGTTACCTAGTAATAGGTTCCTATGTGGGAATTGCAACAGTAGGCATTTTTGTCTTATGGTACACACAAGCATCTTTTCTTGGCATCAATCTTGTCAGTGATGGACACACAGTTATAGAATTGGTTCAGCTTCTCAACTGGAGGGAGTGTCCTTCATGGTCTAATTTCACCGTTACTCCATTTGAAGCCGGCGGCGGTCGCTTGATCACATTTTCAAATCCCTGTGACTATTTTTCAGTTGGAAAAGTAAAGGCAATGACTCTTTCTCTCTCTGTCTTGGTGGCAATTGAGATGTTTAATTCTTTGAATGCTCTCTCAGAAGAGAATAGCTTGAGAACATTACCACCTTGGAAGAACCCTTGGCTTTTGGTAGCCATGACAATATCTTTAGGACTGCATTGTCTCATACTCTACATTCCATTCCTCTCTGAGGTGTTTGGTGTTGCTCCACTAAGTTTGAAAGAGTGGTTTTTGGTGATTCTGATATCAGCACCTGTTATTCTTATTGATGAGATTCTAAAATTTGTGGTGAGGAGTCAAAGGAGGAAGACAAAAGAGAAAGAAGCATGA 3171 0.4131 MHMKVPMEEKPFPAWSWSVEQCLKEYDVKLDKGLNSNEVLKRREKYGWNELAKEKGKPLWKLVLEQFDDMLVKILLVAAFVSFLLAYFEGSESGESGFEAYVEPLVIVLILVLNAIVGVWQENNAEKALEALKELQCESGKVLRDGYFVPDLPARELVPGDIVELRVGDKVPADMRVAVLKTSTLRVEQSSLTGEAMPVLKGTNPIFLDDCELQAKENMVFAGTTVVNGSCICIVITTAMNTEIGKIQKQIHEASFEDTDTPLKKKLDEFGGRLTTSIGIVCLVVWIINYKNFISWDIVDGRPSNIQFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGGKTTASRVIRVEGTTYDPKDGGIVDWTCYNMDANMLAMAEICAVCNDAGVYFDGRLFRATGLPTEAALKVLVEKMGFPDIKSRNKTRDAQVACNNMMDCNSLKLGCCEWWNRRSKRVATLEFDRVRKSMSVIVRESDGQNRLLVKGAVESLLDRCSYVQLADESLVPIDDQCKELLLQRLHGMSSKGLRCLGLAFKDELGEFSDYYADTHPAHKKLLDPTYYSSIESDLVFVGVVGLRDPPREEVHKAIEDCKQAGIRVMVITGDNKSTAEAICKEIKLFSRDEDLTGQSLTGKEFMSLSHSEQVKLLLRHGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAIAEGRAIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRRSDDALISTWVLFRYLVIGSYVGIATVGIFVLWYTQASFLGINLVSDGHTVIELVQLLNWRECPSWSNFTVTPFEAGGGRLITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRTLPPWKNPWLLVAMTISLGLHCLILYIPFLSEVFGVAPLSLKEWFLVILISAPVILIDEILKFVVRSQRRKTKEKEA 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02898 1056 Coils Coil 1043 1056 - -
Car07g02898 1056 Gene3D - 380 631 IPR023299 GO:0000166
Car07g02898 1056 Pfam Cation transporter/ATPase, N-terminus 15 82 IPR004014 -
Car07g02898 1056 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 705 817 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car07g02898 1056 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 307 395 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car07g02898 1056 PANTHER CALCIUM-TRANSPORTING ATPASE 8 1052 - -
Car07g02898 1056 Gene3D - 32 252 - -
Car07g02898 1056 Gene3D - 65 1045 - -
Car07g02898 1056 CDD P-type_ATPase_SERCA 15 1045 - -
Car07g02898 1056 SUPERFAMILY Calcium ATPase, transduction domain A 142 250 IPR008250 -
Car07g02898 1056 Pfam E1-E2 ATPase 136 350 - -
Car07g02898 1056 SUPERFAMILY HAD-like 368 836 IPR036412 -
Car07g02898 1056 SMART Cation_ATPase_N_a_2 13 87 IPR004014 -
Car07g02898 1056 ProSitePatterns E1-E2 ATPases phosphorylation site. 372 378 IPR018303 -
Car07g02898 1056 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 377 628 IPR023299 GO:0000166
Car07g02898 1056 SFLD p-type atpase 351 785 IPR044492 -
Car07g02898 1056 PRINTS P-type cation-transporting ATPase superfamily signature 188 202 - -
Car07g02898 1056 PRINTS P-type cation-transporting ATPase superfamily signature 370 384 - -
Car07g02898 1056 PRINTS P-type cation-transporting ATPase superfamily signature 624 635 - -
Car07g02898 1056 PRINTS P-type cation-transporting ATPase superfamily signature 646 656 - -
Car07g02898 1056 PRINTS P-type cation-transporting ATPase superfamily signature 732 751 - -
Car07g02898 1056 PRINTS P-type cation-transporting ATPase superfamily signature 756 768 - -
Car07g02898 1056 Pfam haloacid dehalogenase-like hydrolase 367 746 - -
Car07g02898 1056 Gene3D - 367 777 IPR023214 -
Car07g02898 1056 PRINTS Sodium/potassium-transporting ATPase signature 363 384 - -
Car07g02898 1056 PRINTS Sodium/potassium-transporting ATPase signature 985 1009 - -
Car07g02898 1056 Pfam Cation transporting ATPase, C-terminus 817 1043 IPR006068 -
Car07g02898 1056 SFLD C1.7: P-type atpase like 351 785 - -
Car07g02898 1056 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 8 1052 - -
Car07g02898 1056 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 1048 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02898 Car-Chr7 54987753 54993568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02898 8 1054 Primary Pumps ATPases(2) AT4G00900 77.735 0.0 1686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02898 K01537 - gmx:100792952 1867.82