Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02895 ATGAATTCGGGTGCTGTTTTAGCATTGCATCCTGCTGACAATGTTTTCAGAACAAGGGAGCCTCCTGATTTTGAGGAGGACTTTGTAGAGAAAGATCCAACCGGCCGGTACGTTAGGTACAATGAAATCTTGGGCAGGGGTGCCTTCAAGACTGTTTATAGAGCATTTGATGAAGTTGATGGAATAGAAGTTGCTTGGAACCAAGTTAGGATTGATGGACTCTTACATTCAGTAGATGATCTTGCAAAATTGTATTCTGAAGTTCATCTATTGAAGTCTTTGAAACATGAAAATATCATTAAGTTCTACAATTCCTGGATCGATGATAAACAGAAAACTGTTAACATGATTACTGAACTCTTCACATCCGGAAATTTAAGACTGTACCGTAAAAAGCATAAATATGTCGAAATGAAAGCCATTAAAGGTTGGGCAAGGCAGATTCTTCAAGGCTTAGTATATCTTCACGGTCACAAGCCACCGATTATTCACAGAGACTTGAAATGCGACAACATCTTTGTGAATGGAAACCAAGGAGAAGTTAAGATAGGTGATCTTGGTTTGGCAATTGTTATGCAGCAGGAAACCGCTCGGAGTGTTATCGGGACACCTGAGTTTATGGCGCCAGAATTATATGAAGAGGAGTACAATGAACTTGTTGACATCTATTCATTTGGGATGTCAATGTTGGAGATGGTTACTCTTGAGTATCCTTATAATGAATGCAACAATCCAGCTCAAATATTTAAGAAAGTTACCTCGGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGACCCTCAAATTAAGGAGTTTATTGAGAAATGCCTGGTTCCAGCGACTGAGAGATTGTCTGCAGAGGAGCTTCTTAATGATCCATTTCTACAAATTGAGAATCCAAAGGATCCATGTATTTATCCTTTACAGTTAGCTATGAAAACTCCAAGAGCTACAGATATACCCAAATCTGGTACTCCATCCATGGACATTGATGCTGACTACAAACTGTTTTCGGGAAGTAACTACGCTGAAAGCAGTCAGGGAAGTCCACATTGTCCTGTTTTTGAAGTCCAAAGGACTAATAAGAACAACGAGTTTAGGTTAAAAGGGACTAAAAACGATGATAACTCGGTGTCATTGACTTTGCGTATTGCTGATACATGTGGTCGAGTAAGGAATATACATTTTCTCTTTTACCTTGATACAGATACCGCAGTCTCCGTGGCATCGGAAATGGTTGAACATTTGGAGCTGGCAGATCATGATGTGGCTTTCATAGCCGAGCTTATTGATTACTTGATAATGAAGCTTCTTCCTTGGTGGAAGCCTTCACCTGATCATAACTCAACTGGAGAAATAAGTCTTTGTAGTGGGTCTTCTAATGTGGATCGCCAAATCTTAATGGCATGCCAATGGAGTTCTATCCTAGAAAGTATTCCTGCTAAAAGATTTAATCGTCAAGACAGCTTTTCCGGGTTTAATACAATTCCTAGAGAAGGTTTCGAGACAGTTGGAAAGAGCTGTTTTTTCAAAAACATCAATAAAGCTGTGTCGAATGCTGTCAGTGACTATAATCATCCTTCTCCTTGTTTGGTTAACTCGGAAGATCGATATTCGCGAGGATCAGGAGCTTCTGAGATAGCTGTTGACGACACTTCTATGAAAAATGAAAATAGTAATGACTCCAACATTAGTAGCTGTTTTAAATGTCTAAGAAGGTCCATACCTGGTCTTGAAGTCGGCAATGCGTACTTCGAAGACTGTAAATTGCAGGCAGCAGATTACAATGTTGGAGAAAGCACTGTGAACTCAGGATCATCAAATGTTAGCTGTTGTTCTGTTTCTTCAACTGATAAAGATATTGATCTTGAGCTCAAGCTTGAACTTGATGCAATTGAGTCACAATATCAGCATTGGATCGAGGAACTCTCTAGGATGAAGTTGGAGGCATTGGAAGCCTCTAGAAGGAGATGGATGGCTAAGAAGAAAGTAGCTGTTCAtgattga 2007 0.3976 MNSGAVLALHPADNVFRTREPPDFEEDFVEKDPTGRYVRYNEILGRGAFKTVYRAFDEVDGIEVAWNQVRIDGLLHSVDDLAKLYSEVHLLKSLKHENIIKFYNSWIDDKQKTVNMITELFTSGNLRLYRKKHKYVEMKAIKGWARQILQGLVYLHGHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQETARSVIGTPEFMAPELYEEEYNELVDIYSFGMSMLEMVTLEYPYNECNNPAQIFKKVTSGIKPASLNKVSDPQIKEFIEKCLVPATERLSAEELLNDPFLQIENPKDPCIYPLQLAMKTPRATDIPKSGTPSMDIDADYKLFSGSNYAESSQGSPHCPVFEVQRTNKNNEFRLKGTKNDDNSVSLTLRIADTCGRVRNIHFLFYLDTDTAVSVASEMVEHLELADHDVAFIAELIDYLIMKLLPWWKPSPDHNSTGEISLCSGSSNVDRQILMACQWSSILESIPAKRFNRQDSFSGFNTIPREGFETVGKSCFFKNINKAVSNAVSDYNHPSPCLVNSEDRYSRGSGASEIAVDDTSMKNENSNDSNISSCFKCLRRSIPGLEVGNAYFEDCKLQAADYNVGESTVNSGSSNVSCCSVSSTDKDIDLELKLELDAIESQYQHWIEELSRMKLEALEASRRRWMAKKKVAVHD 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02895 668 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 379 434 IPR024678 GO:0004674|GO:0005524
Car07g02895 668 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02895 668 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02895 668 Gene3D Transferase(Phosphotransferase) domain 1 121 300 - -
Car07g02895 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Car07g02895 668 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 667 - -
Car07g02895 668 PANTHER KINASE DOMAIN PROTEIN 2 667 - -
Car07g02895 668 SUPERFAMILY Protein kinase-like (PK-like) 40 296 IPR011009 -
Car07g02895 668 Gene3D Phosphorylase Kinase; domain 1 23 119 - -
Car07g02895 668 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02895 668 Gene3D - 376 461 - -
Car07g02895 668 CDD STKc_WNK 36 295 - -
Car07g02895 668 Coils Coil 629 649 - -
Car07g02895 668 MobiDBLite consensus disorder prediction 542 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02895 Car-Chr7 54959775 54964352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02895 592 667 MAP Kinase Kinase Kinase AT5G41990 33.684 3.46e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car07g02895 Pkinase 8.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02895 K08867 - gmx:100809602 946.036