Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02894 ATGAGAGAAAAAGGAAAAATTTGCAATCCAAGTCCAAGTGAGATGGAGTCAAAGAAGAAAATGAAAGATATGGAAAAGAGCGTGGATCCTGAACTATGGCATGCATGTGCTGGAGGAATGGTGCAAATTCCACAAGTTAACAATAAGATATTCTACTTCCCTCAAGGTCACGCAGAACATGCGCGGGAACTGGTGAATTTCATGGATTACCCCCAAATTCCACATTTGATTCCATGTAGAGTTGTAGCTACCAAATATATGGCTGATCATGAGACTGACGAGGTGTATGTGAAACTCAAACTTGTTCCTTTGCACAGTGAGGTTAGTTTGGAGGATGACAACGCTGAATGCTCCACCAAAGCGTCTGAAACTAAAGATAAACCTCAGTGTTTTGCCAAAATCTTGACACAATCTGATGCAAACAATGGTGGTGGTTTTTCTTGTCCTAGATATTGTGCAGAAAAGCTTTTTCCTTGTTTGGACTATTCCACTAGCCCTCCTGTGCAAGACATTTTCCCTAAAGACATTCACGACCAAAAATGGCAATTTAAACATATTTATAGGGGCACGCCCAAGCGTCATTTATTGACCACTGGTTGGAGCCAGTTTGTGACTCATAAGAAACTTGTTGCAGGGGATTCTATTGTGTTTCTAAAGGCTGAAAATGGAGATATTCGTTTCGGAATTCGCAGGGCTAGAAGGGAAATTTGTGCTGTACTTGAACCTCCATCAGGGTATGAACCTGCTACTGCTACTGCAATTCAAGAGGAAGATAATAATAACAGTAAAGTTCAAAGAAATAGTAGAGGCAATGCATTAAGAATAAGTGATGGTATGATGGGTAAGGGTAAAGTCAGTGCTCAACAAGTTATTCAAGCAGCAACACTTGCTGCTAATATGCAGCCTTTTGAGGTAGTTTACTATCCTCGCTCGAATACTCCCGAATTTTTTGTCAAAACTTCTGCTGTTAGAGCATCACTTCATATTAGGTGGTTTCCTGGAATGAGGATCCAAATGGCCATTGAAACTGAGGACTCGTCAAGGATAAGTTGGTTTAACGGAACTGTCACTTTTTTTGAGCCTATTGATCCAAAATGGCCTCATTCTCCTTGGAGAGCTCTTCAGGTTACATGGGATGATACAGAGTTACTACAAAATGTAAAAAGGTTGAATCCATGGCAAGTTAAAATAGAAGCAAATGTTCCACCCATTCATCTTCCAACTTTCACACCACCCCCACCAAGGAAGAAACTCAGGTTACTTCCACACCTAACTTTCCCCATTGATCACCAATTTTCAATGTCAAATTTTTCAAACATCTTTCAAAGTCCTATCAGTCCATTTTGTCAGTTCCCCGAAATTAGTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCATTTTCTTCCTAATCTCCAACCATTTAATCACACTACTACAACATCGACGAATGTCTCTTGTAACACGAGATTACAGAAGTCGAACAACGATGACAATATGTTGTGTATGCTATCGATATCAAGTTCTACTGAATCTTCACAAAAATCGGATCATGTTAAGCAACAACAACTTGTGCTTTTTGGAAAAAAAATTATAATTGAACAACAAGTCCCTCCAAGTACAATTTTTGAAGCTAAAAATGAAAATGCCGAGAAATCAATGAATCAAGCTGGAAATGAAAATGCTGAAAAATTAACGGATGATTTTTCTAATCTTCATCTACCATGCCTATCAGAACGTCCCTTTTTAGAGAGGTTAGAGTTGAATGAAAGCAAAGAAACAAAAGATGGAGAACATAAGATGAATCTCTCAGAGCCTTCACCAAAATGGTTAGGAGGTTGA 1839 0.3942 MREKGKICNPSPSEMESKKKMKDMEKSVDPELWHACAGGMVQIPQVNNKIFYFPQGHAEHARELVNFMDYPQIPHLIPCRVVATKYMADHETDEVYVKLKLVPLHSEVSLEDDNAECSTKASETKDKPQCFAKILTQSDANNGGGFSCPRYCAEKLFPCLDYSTSPPVQDIFPKDIHDQKWQFKHIYRGTPKRHLLTTGWSQFVTHKKLVAGDSIVFLKAENGDIRFGIRRARREICAVLEPPSGYEPATATAIQEEDNNNSKVQRNSRGNALRISDGMMGKGKVSAQQVIQAATLAANMQPFEVVYYPRSNTPEFFVKTSAVRASLHIRWFPGMRIQMAIETEDSSRISWFNGTVTFFEPIDPKWPHSPWRALQVTWDDTELLQNVKRLNPWQVKIEANVPPIHLPTFTPPPPRKKLRLLPHLTFPIDHQFSMSNFSNIFQSPISPFCQFPEISPAGMQGARHAHFLPNLQPFNHTTTTSTNVSCNTRLQKSNNDDNMLCMLSISSSTESSQKSDHVKQQQLVLFGKKIIIEQQVPPSTIFEAKNENAEKSMNQAGNENAEKLTDDFSNLHLPCLSERPFLERLELNESKETKDGEHKMNLSEPSPKWLGG 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02894 612 SMART B3_2 131 233 IPR003340 GO:0003677
Car07g02894 612 Pfam Auxin response factor 293 375 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Car07g02894 612 SUPERFAMILY DNA-binding pseudobarrel domain 125 234 IPR015300 -
Car07g02894 612 MobiDBLite consensus disorder prediction 587 612 - -
Car07g02894 612 Gene3D - 129 232 IPR015300 -
Car07g02894 612 MobiDBLite consensus disorder prediction 587 602 - -
Car07g02894 612 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 558 IPR044835 GO:0003677|GO:0006355|GO:0009725
Car07g02894 612 Pfam B3 DNA binding domain 131 232 IPR003340 GO:0003677
Car07g02894 612 Coils Coil 546 566 - -
Car07g02894 612 PANTHER AUXIN RESPONSE FACTOR 16 558 - -
Car07g02894 612 CDD B3_DNA 130 231 IPR003340 GO:0003677
Car07g02894 612 MobiDBLite consensus disorder prediction 1 22 - -
Car07g02894 612 ProSiteProfiles B3 DNA-binding domain profile. 131 233 IPR003340 GO:0003677
Car07g02894 612 Gene3D - 332 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02894 Car-Chr7 54954273 54956297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02894 25 560 B3 DNA Binding Superfamily AT4G30080 46.942 1.42e-160 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Car07g02894 B3 3.1e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02894 - - mtr:MTR_7g101280 630.172