Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02881 ATGGATGAAGGTATGGGAGCTGCCTATGGCACAACAAAGAGTGGTGTGGGAGTGGCTTCCATGGGTGTGATGAGACCGGAGCTGGTGATGAAGTCTATCGTACCTGTTGTTATGGCTGGTGTTTTGGGTATTTATGGTCTTATTATTGATGTTATTATCAGTACTGGGATTAACCCCAAGGCTAAATCTTATTACCTTTTTGACGGTTATGCACATCTCTCCTCTGGTCTTGCCTGTGGGCTTGCTGGGCTCTCTGCTGGCATGGCTATTGGTATTGTTGGTGATGCCGGTGTTAGGTATGATTCTTCTACCTTAGTAATTGATTTGTGTAATTAA 336 0.4435 MDEGMGAAYGTTKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIDVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRYDSSTLVIDLCN 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02881 111 PANTHER V-TYPE PROTON ATPASE SUBUNIT C3 5 102 - -
Car07g02881 111 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 5 98 IPR011555 GO:0033179|GO:0046961|GO:1902600
Car07g02881 111 PRINTS Vacuolar ATP synthase 16kDa subunit signature 7 31 IPR000245 GO:0033179|GO:0046961|GO:1902600
Car07g02881 111 PRINTS Vacuolar ATP synthase 16kDa subunit signature 33 57 IPR000245 GO:0033179|GO:0046961|GO:1902600
Car07g02881 111 PRINTS Vacuolar ATP synthase 16kDa subunit signature 84 110 IPR000245 GO:0033179|GO:0046961|GO:1902600
Car07g02881 111 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 5 102 - -
Car07g02881 111 Gene3D - 2 106 IPR035921 -
Car07g02881 111 SUPERFAMILY F1F0 ATP synthase subunit C 64 99 IPR035921 -
Car07g02881 111 Pfam ATP synthase subunit C 4 53 IPR002379 GO:0015078|GO:0033177|GO:1902600
Car07g02881 111 Pfam ATP synthase subunit C 74 100 IPR002379 GO:0015078|GO:0033177|GO:1902600
Car07g02881 111 CDD ATP-synt_Vo_c_ATP6C_rpt1 5 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02881 Car-Chr7 54777856 54778191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02881 1 104 Primary Pumps ATPases(2) AT4G34720 91.346 5.29e-61 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02881 K02155 - csin:114292490 168.318