Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02868 ATGGGCATCTTGAAGCTCCTTTTCTACTTAACCTTTCCTGTCATATATGCCTTTAACGATTGCCAATTTTATTTATGTGGCAACAATACTTTCCTTATTCGTTTCCCCTTTCAACTAGGTGGACAATATCCTTATTGTGGCTATCCTGGTTTCAACTTAATTTGTACAAACAGCAGCAAAACAGTTCTAAAACTTCCTTACTCTGAAAAATTCTATGTACGCAGCATAAACTATCTCACACAACAGTTACTAGTCTACGATCCTGATGATTGCCTTCCCAAACGTCTTCTAAGCCTCAATTTTTCAAATTCTCCTTTCACTGCTACTTTTAGTCGTGATTACACATTCTTACGCTGTTCATCTCAGAATATAGGGTCGCAGTTCATTCCCATTGATTGTCTTAGTAATTCAACTTACTTTGTATCTGCTATCCCTTCAGCGAACTTGGTCAATTCACCGCCTGAGTCTTGTTCTGTTATCAAAAGGCTTTCAATTCCAGTTGCAAGACCAGAACGTTTTGAAGTAAATCTCAGAGATGACCTTAGTGCAGATATTCAATTAACATGGGACAAACCTGATTGCCGTTATTGTGAATCACATCAGTTAATGTGTGGATTTGAAAGCAGTTATAGCAATCAAATTGTCTGTATCTCTGATTACCAAGCAGGTACATCACGACAAGGACTCAAAATTTTCAGAATAATAGCATTATGCATTACTGGGCCAGCTCTAATATTTATCCTACTAATGGCAAGTTGTGTATGCTACAAAGATAGAATAGCCAACATTACAAGAAATGCTGCTTCTCGATCAGCACCAGCTGCAATAACGCCACAATCTGAACTAACAACAATAACTACGGGTCTAGATGAATCCACAATTGAATCTTATGAGAAAGTAGTTCTTGGAAAGAGTCGACGCGTGCCGGGACCAAACGATGAATGTTGCTGGATATGCTTGTCTGAATACAATAGTGAAGAGACAATAAGATGCATTCCTGAATGCAAACATTGTTTCCATGCTGATTGCATTGATGAGTGGCTTCGTATGAATATTACATGTCCTGTTTGTCGTAACTCACCTTCTCCTTCTCCACTTAATAATGTTACTTCTAGTGATTCTTGA 1125 0.3813 MGILKLLFYLTFPVIYAFNDCQFYLCGNNTFLIRFPFQLGGQYPYCGYPGFNLICTNSSKTVLKLPYSEKFYVRSINYLTQQLLVYDPDDCLPKRLLSLNFSNSPFTATFSRDYTFLRCSSQNIGSQFIPIDCLSNSTYFVSAIPSANLVNSPPESCSVIKRLSIPVARPERFEVNLRDDLSADIQLTWDKPDCRYCESHQLMCGFESSYSNQIVCISDYQAGTSRQGLKIFRIIALCITGPALIFILLMASCVCYKDRIANITRNAASRSAPAAITPQSELTTITTGLDESTIESYEKVVLGKSRRVPGPNDECCWICLSEYNSEETIRCIPECKHCFHADCIDEWLRMNITCPVCRNSPSPSPLNNVTSSDS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02868 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 363 IPR013083 -
Car07g02868 374 Pfam Wall-associated receptor kinase C-terminal 154 218 IPR032872 -
Car07g02868 374 ProSiteProfiles Zinc finger RING-type profile. 316 358 IPR001841 -
Car07g02868 374 ProSitePatterns Zinc finger PHD-type signature. 316 357 IPR019786 -
Car07g02868 374 SMART ring_2 316 357 IPR001841 -
Car07g02868 374 SUPERFAMILY RING/U-box 307 361 - -
Car07g02868 374 Pfam Ring finger domain 316 358 IPR001841 -
Car07g02868 374 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 368 - -
Car07g02868 374 Pfam Wall-associated receptor kinase galacturonan-binding 21 87 IPR025287 GO:0030247
Car07g02868 374 PANTHER RING-H2 FINGER PROTEIN ATL21A-RELATED 6 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02868 Car-Chr7 54514694 54517549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02868 21 363 C3H Transcription Factor Family AT2G25410 42.651 2.11e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02868 - - aprc:113851081 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03131 03 76177149 76179642 Car07g02868 07 54514694 54517549 PCT