Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02857 ATGGAAGAGAACATGAAGTGTGAAAAAATTGGTCTCATTAGTGAACTAATGCAAGGGGAGGAGCTAACAAAGAAGCTTTATGACCAACTCTTCTCTCcatcatcatcatcatcatcatcatcatcatcatcaccatcaccatcaacatcatcaCATGTATCTAATGAAGTCTTAATTGACAAAATACTTTTGTCCATTGAAAAAGCACTCACCATGGTGAAGGGTAATGTGGGACAAATTAAGACAAACAATGTCAACATAATTGATTCTTATTGTTCAAATGGAACTCCCAAAAGTGAGATTCAAGACTCAAAATTCAAGCACAAACATGTCTCCAAGAAAAGAAAAACCATGCCTATGTGGACAGAGCAAGTAAAGTTATACTTAGGAACAGCACCTGAGGGGTCTATGGAGGATGGTTACAGCTGGAGAAAGTATGGACAAAAGGATATTCTTGGAGCTAAGTTTCCAAGAGGATATTACAGATGCACACATAGAAATGCACAAGGTTGTCTAGCTACTAAGCAAATGCAAAAATCAGAAGAAGATCCAATGATTTGTGAGATAACCTACAAAGGAAGACACACATGCACCCAAGCAAGTAATTTGAACAAGACACACCCATCAAAAATAAAGTTGACATTTGGAAAAAATAAATCACAACAACTTCATCAAAAGAATCAACCACAAGATCAAGAGAAAATACAATCACTCCAACAAATAATTTTCTCTAAAATAGAGGAATTTGACAACATATTTCCACCATTCACCTTTTCATCTCAATCTATTGGATCTCAAAATGAGGATAACAACATATTTTTAGAGACCAATATGATTGAAAACAATTTCATGGAAAATGAGaacaacaacaacaacaacaTATTTTTAGAGTCAAACATTTTCAGCTTGTCACCAATCCATTTGGAGAGCAATGGACTAGGCCCATGTGAGTCTGACATTTCAGAGATAATTTCAGGCCCAAATTCAGTTGTCAATTCACCAATAGATTTGGATATCTTTGATGACATAAATTTCGACATGGATTTCACCATCAACGCACAAGAACTTTGTTGA 1074 0.3296 MEENMKCEKIGLISELMQGEELTKKLYDQLFSPSSSSSSSSSSSPSPSTSSHVSNEVLIDKILLSIEKALTMVKGNVGQIKTNNVNIIDSYCSNGTPKSEIQDSKFKHKHVSKKRKTMPMWTEQVKLYLGTAPEGSMEDGYSWRKYGQKDILGAKFPRGYYRCTHRNAQGCLATKQMQKSEEDPMICEITYKGRHTCTQASNLNKTHPSKIKLTFGKNKSQQLHQKNQPQDQEKIQSLQQIIFSKIEEFDNIFPPFTFSSQSIGSQNEDNNIFLETNMIENNFMENENNNNNNIFLESNIFSLSPIHLESNGLGPCESDISEIISGPNSVVNSPIDLDIFDDINFDMDFTINAQELC 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02857 357 SUPERFAMILY WRKY DNA-binding domain 135 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g02857 357 SMART WRKY_cls 137 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g02857 357 Gene3D WRKY domain 122 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g02857 357 Pfam WRKY DNA -binding domain 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g02857 357 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 355 IPR044810 GO:0003700
Car07g02857 357 MobiDBLite consensus disorder prediction 31 52 - -
Car07g02857 357 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 1 355 - -
Car07g02857 357 ProSiteProfiles WRKY domain profile. 132 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02857 Car-Chr7 54289900 54291950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02857 48 208 WRKY Transcription Factor Family AT5G24110 45.399 5.22e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car07g02857 WRKY 4.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02857 - - aprc:113849885 357.451