Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02840 ATGGACACTCAATTacatcaacaacaacaaaaacaaaaaTTCGTCCAAGTAGAAGAAGGAGAAGAAAATCGATTGCTACAATGCGAAGAATGTGAGACAATACCATTGTCTACGCCGTTGTCCTCTCTATCAACAATATTAGATGATGGAAATAGAGAGGACTATGTATACGCGGCGAAGGACAAGGTCCATATTTTCGACTTGGAGTCGAATAGTGATACCACTGGATCAACAGTGGTGCCACCTTTTTCGTGGAAGAAGCTCTGGCTCTTCACAGGACCAGGGCTTCTAATGAGCGTGGCGTTTTTAGATCCAGGAAACTTGGAAGGGGACTTGCAAGCTGGTGCAATTGCAGGGTATTCATTACTTTGGCTTTTAATGTGGTCTACCATCATGGGACTCCTCATACAACTTTTATCGGCGAGGCTTGGTGTCGCGACGGGGCGCCACTTGGCAGAGCTTTGTAGGGAGGAGTATTCCAATTGGGCTAGGCTAGTTTTGTGGTTTTTAGCTGAATTGGCTTTGATTGCTGCTGATATACAAGAGGTTATTGGTAGTGCTATTGCTCTTAAGATTCTTAGCCATGGGGTTCTTCCCATTTGGGCTGGTGTTGTAATCACAGCCTTTGATTGTTTCTTCTTTCTATTTTTGGAAAATTATGGAGTGAGGAAGTTGGAAGGTGTTTTTGCAATTTTCATAGGAACAATGGGGTTTTCTTTTGCATGGATGTTCTTTGATACGAAGCCAAGTGAAGAAGAACTTCTTATGGGTCTTTTGATCCCAAGAGTAAGCTCAAAAACACTTCGTCAAGCAGTAGAAATAGTAGGATGTGTTATAACTCCACACAATGTGTTTCTCCATTCAGCATTAGTACAATCAAGAGACATAGACATCAGAAACAAAGGCCAAGTTCAAGAGGCTCTAAATTACTACTCAATTGAATCCTCAATTGCACTTCTAATAACCTTAATAATAAATCTTTTTGTTATAACCGTTTTTGCTAGAGTATTCTATGGTACAGAACAAGCCAAAGACATAGGATTAGTAAATGCAGGACAATATCTTGAGGATAAATATGGTGGTGGATTTTTTCCAATACTTTATATTTGGGGTATTGGTTTATTAGCAGCTGGTCAAAGTAGCACTATTACGGGTACATATGCTGGACAATTTATAACCGAAGGTTTTTTAAAATTAAATATTAAAAAATGGTTGAGGGCATTGATAACTAGAAGTTGTGCTATTGTTCCAACTATGATAGTTGCAATTGTTTTTAATACTTCCGAAGGTTCATTGGATACTTTAAATGAATGGCTTAATGTGCTTCAAGCTATTCAAATTCCTTTTGCACTTATTCCTCTTCTTACTTTGGTGTCTAAAGAACAGGTCATGGGGAGTTTCAGAATTGGGCCTATAGTTGAGAGGGTGGCATGGACATTGGTGGTGCTTGTAATAATGCTTTATGGGTATATGTTATTAGATTTCTTCCTCTCTGAAGTGAAGGGATTGTTGTTTGGATTTTTAGTGTTCCTTGGTGCTGGAGCATGGATTTCTTTTATTGTGTTTCTTCTCAAACATAGTGGTGCTATTTCTTCCATCTTTGTCAGATCCCCAAATTCTGAAGGCTTTTATCTTGCAGGAGACTAG 1647 0.3855 MDTQLHQQQQKQKFVQVEEGEENRLLQCEECETIPLSTPLSSLSTILDDGNREDYVYAAKDKVHIFDLESNSDTTGSTVVPPFSWKKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTIMGLLIQLLSARLGVATGRHLAELCREEYSNWARLVLWFLAELALIAADIQEVIGSAIALKILSHGVLPIWAGVVITAFDCFFFLFLENYGVRKLEGVFAIFIGTMGFSFAWMFFDTKPSEEELLMGLLIPRVSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEALNYYSIESSIALLITLIINLFVITVFARVFYGTEQAKDIGLVNAGQYLEDKYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMIVAIVFNTSEGSLDTLNEWLNVLQAIQIPFALIPLLTLVSKEQVMGSFRIGPIVERVAWTLVVLVIMLYGYMLLDFFLSEVKGLLFGFLVFLGAGAWISFIVFLLKHSGAISSIFVRSPNSEGFYLAGD 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02840 548 Pfam Natural resistance-associated macrophage protein 109 470 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g02840 548 PRINTS Natural resistance-associated macrophage protein signature 167 193 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g02840 548 PRINTS Natural resistance-associated macrophage protein signature 197 216 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g02840 548 PRINTS Natural resistance-associated macrophage protein signature 222 243 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g02840 548 PRINTS Natural resistance-associated macrophage protein signature 271 294 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g02840 548 PRINTS Natural resistance-associated macrophage protein signature 378 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g02840 548 PRINTS Natural resistance-associated macrophage protein signature 406 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g02840 548 PRINTS Natural resistance-associated macrophage protein signature 440 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g02840 548 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 48 548 - -
Car07g02840 548 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 86 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g02840 548 Hamap Divalent metal cation transporter MntH [mntH]. 74 496 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car07g02840 548 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 48 548 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02840 Car-Chr7 54007433 54009393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02840 51 527 Inorganic Solute Cotransporters AT1G47240 73.375 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02840 K21398 - gmx:100801411 898.656