Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02826 ATGGGAAACAGTGAAGATGGGAAATCTGTTAAGACTGAAAAGCCTTTTTCACCTGTAACAACTGATCAGACCAATCAAGCTAACCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGGCATACTATGGGCAAAGAGTCAATGTTCCACCATACTTCAACTCAGCTGTTGCTTCGGGTCATGCTCCTCACCCATACATGTGGGGACCACCACAGGCTATGATGCCACCATATGGGCAATCATATGCAACATTTTATTCACATGGAGGGGTTTATACCCACCCTGCGGTTGCTATCGGGCCAAATTCACATGGTCAAGGAATTCCATCTTCACCTGCTGCTGGAACTCTTTCAATAGAGACACCAACCAAATCATCTGGAAACACTGATCAGGGTTTAATGAAAAAATTGAAAGGATTTGATGGGCTTGCGATGTCAATAGGCAATAGCAATGCTGAGCGTGGAGCGGAAAACAGACTATCGCAGAGTGTGGATACCGAGGGTTCCAGCGATGGAAGTGATGGCAACACTACAGGGACGAATGGAACAAGAAAAAGAAGCCATGACAGAACACCAACCACCACTGATGGAGAAGGGAAAACTGAGATGCAAAATAGTCCAGTTTGCAAAGAGACTACAGCTTCCAAAAAGATGGTGTCGGCTACCCCAGCTGGTGTTGCAGAAAAATTTGTTCGACCTGTAGTTTCTTCAGGTATGACCACAGCACTCGAGCTGAGGAATGCTGCAACTGTTTCCGTCAGTGCCCCACAACCTTGTGGAGTTATCCCTCCTGAAGCTTGGATACAGAATGAGCGTGAGCTGAAACGTGAGAGGAGGAAACAATCAAACCGTGAATCTGCTAGAAGGTCCAGGCTTAGGAAACAGGCTGAGGCTGAAGAATTGGCGCGAAAAGTCGATACATTGATTGCTGAGAATTTGTCGCTGAAAGCGGAAATGAATCAATTGGCTGAAAATTCTGAAAAGCTGAAAATGGAAAATGCTACATTGAAGGAAAAGCTGAAAAACACTCAACTGGGACAAACAGAAGAGATAATTTTGAACAGCATTGACAAAAGGGCTACACCTGTAAGCACAGAAAATTTACTATCTAGAGTTAATAATTCCAATTCTAATGACAGAACTGCAGAAGAAGATAATGGTTACTGTGAGAGCAACAAACCAAATTCTGGTACAAAACTTCATCAACTACTTGATACAAATCCTAGAGCTAATGCTGTTGCAGCTAGTTGA 1257 0.4383 MGNSEDGKSVKTEKPFSPVTTDQTNQANQPNIHVYPDWAAMQAYYGQRVNVPPYFNSAVASGHAPHPYMWGPPQAMMPPYGQSYATFYSHGGVYTHPAVAIGPNSHGQGIPSSPAAGTLSIETPTKSSGNTDQGLMKKLKGFDGLAMSIGNSNAERGAENRLSQSVDTEGSSDGSDGNTTGTNGTRKRSHDRTPTTTDGEGKTEMQNSPVCKETTASKKMVSATPAGVAEKFVRPVVSSGMTTALELRNAATVSVSAPQPCGVIPPEAWIQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVDTLIAENLSLKAEMNQLAENSEKLKMENATLKEKLKNTQLGQTEEIILNSIDKRATPVSTENLLSRVNNSNSNDRTAEEDNGYCESNKPNSGTKLHQLLDTNPRANAVAAS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02826 418 SMART brlzneu 273 337 IPR004827 GO:0003700|GO:0006355
Car07g02826 418 MobiDBLite consensus disorder prediction 1 30 - -
Car07g02826 418 SUPERFAMILY Leucine zipper domain 276 332 IPR046347 GO:0003700|GO:0006355
Car07g02826 418 PANTHER G-BOX-BINDING FACTOR 3 1 418 - -
Car07g02826 418 MobiDBLite consensus disorder prediction 199 221 - -
Car07g02826 418 MobiDBLite consensus disorder prediction 374 407 - -
Car07g02826 418 MobiDBLite consensus disorder prediction 150 224 - -
Car07g02826 418 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Car07g02826 418 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 280 295 IPR004827 GO:0003700|GO:0006355
Car07g02826 418 MobiDBLite consensus disorder prediction 14 30 - -
Car07g02826 418 MobiDBLite consensus disorder prediction 278 298 - -
Car07g02826 418 MobiDBLite consensus disorder prediction 106 134 - -
Car07g02826 418 Pfam Disordered region downstream of MFMR 132 256 - -
Car07g02826 418 Pfam bZIP transcription factor 273 335 IPR004827 GO:0003700|GO:0006355
Car07g02826 418 Coils Coil 286 341 - -
Car07g02826 418 MobiDBLite consensus disorder prediction 104 136 - -
Car07g02826 418 MobiDBLite consensus disorder prediction 374 418 - -
Car07g02826 418 Gene3D - 276 349 - -
Car07g02826 418 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 418 IPR044827 GO:0003700|GO:0006355|GO:0043565
Car07g02826 418 CDD bZIP_plant_GBF1 278 326 IPR045314 GO:0003700|GO:0006355
Car07g02826 418 MobiDBLite consensus disorder prediction 153 184 - -
Car07g02826 418 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 275 338 IPR004827 GO:0003700|GO:0006355
Car07g02826 418 SUPERFAMILY BLRF2-like 320 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02826 Car-Chr7 53845221 53851348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02826 1 417 bZIP Transcription Factor Family AT2G46270 50.118 1.94e-109 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car07g02826 MFMR_assoc 1.2e-15 No_clan