Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02820 ATGAAAGTATATACTTTGGTGATTTTTTTTGGGTTTTCATTGGAAGAAGTGATTATAATCGTTTGGCATGAGGTAAATTGTTGTGGTGGTTTACCTTTTGCAGCTTTTCTCGAATGGGATAAGGGAATCAGAGCTGAGACATGTCATCTCAGAGTTAATGTCTCTGAAGAAGCTGCTCTCATGGAGCTACTTAATTTTATGTATAGTAATACATTGAGCATTAAGACAGCTCCTGGTTTGCTGGATGTCTTGATGGCTGCTGATAAATTTGAAGTTGCTTCATGCATGAGATATTGTAGCCGGTTGCTGCGAAACATAACCATGACACCTGAATCTGCATGA 342 0.386 MKVYTLVIFFGFSLEEVIIIVWHEVNCCGGLPFAAFLEWDKGIRAETCHLRVNVSEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNITMTPESA 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02820 113 Pfam BTB/POZ domain 45 105 IPR000210 GO:0005515
Car07g02820 113 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 49 113 - -
Car07g02820 113 Gene3D Potassium Channel Kv1.1; Chain A 28 112 IPR011333 -
Car07g02820 113 SUPERFAMILY POZ domain 55 105 IPR011333 -
Car07g02820 113 PANTHER OS02G0260700 PROTEIN 49 113 IPR045890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02820 Car-Chr7 53822218 53822656 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Car07g02820 BTB 2.7e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02820 - - vvi:100241455 116.316