Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02810 ATGAATAACCCACACCAATGGTCAATTGTTGATGATGTTATTGTCTTTAATAACATGTTCATCATGTGTCACAACCAGAACATCGagaacaatagaagaagaacaagaagaatgaacaaTGTTCATCAACAGGTTCAATGGTCAATGGTCGACGATGTTATTCTCTTTGATCACTATGTTAATGATGTTGTTCATTTGGGTCCACGCAACAACAACAATATAGAGAACAATGGTACAAATTTTGTGGTGCATCATGGTGCTACAAATTTTGAAGTAAATGGTGTGAGTGATCAAGATTCTATTGAATGTGTAGCAATTGATGAAACAAGAACAGAGTCTTCTTCAAAATTAGAGTCAGAATCTATGTGCTGTATTTGTCTTGGAGACTTATCAAATGGTTCAAAAATGACTCAACCTTGTTCTCATGTATTTCACCAACATTGTATTAATAAGTGGTTCAACATTAGCAAGACATGTCCTCTATGTCGCAGAGCCATTAATTAG 504 0.3294 MNNPHQWSIVDDVIVFNNMFIMCHNQNIENNRRRTRRMNNVHQQVQWSMVDDVILFDHYVNDVVHLGPRNNNNIENNGTNFVVHHGATNFEVNGVSDQDSIECVAIDETRTESSSKLESESMCCICLGDLSNGSKMTQPCSHVFHQHCINKWFNISKTCPLCRRAIN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02810 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 167 IPR013083 -
Car07g02810 167 Pfam Ring finger domain 122 163 IPR001841 -
Car07g02810 167 SMART ring_2 123 162 IPR001841 -
Car07g02810 167 SMART ringv_2 122 163 IPR011016 GO:0008270
Car07g02810 167 PANTHER TARGET OF ERK KINASE MPK-1 53 166 - -
Car07g02810 167 ProSiteProfiles Zinc finger RING-type profile. 123 163 IPR001841 -
Car07g02810 167 PANTHER GB|AAF27103.1 53 166 - -
Car07g02810 167 SUPERFAMILY RING/U-box 114 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02810 Car-Chr7 53703571 53704141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02810 98 166 C3H Transcription Factor Family AT1G49850 40.845 8.40e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02810 K22753 - cam:101492064 85.8853