Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02795 ATGTCTTCCTCAAACCCTTATTCACCATCACCACCAATTCCTTATCTCACTAACCTCGGCTTCGGCTACTCCATAGCTATAGCCCTCGGCTTCCTCTTCCTTCTTTCAACCTTAATTCTTTCTTCCTATCTTTGTTGCCGCACTTTCCGTAACCGTCATAACCGTCATACCAATCAATCTAACTCAGACGGCGTCGTTTTGCCGCGCGTCATTTTCGTTGCGGAAGACGACGAACAAGACGGCGTCGTTTTGGGTTTGGAACAAAATGTTATTAATTCGTATCCGAGGTTTCAGTTTGGTAAAGATTCCGGTTATGACACCACGTGCTCGATCTGTTTGAGTGAGTACAAGGATTCGGAGATGTTGAGGATGATGCCGGAATGTAGACACTATTTCCATCTATGTTGTCTTGATTCGTGGTTGAAACTTAACGGTTCTTGTCCCGTTTGTCGGAACTCGCCTATGCCTACGCCGTTATCTACGCCGTTACAAGAAGTTGTTCCGCTTTCTCATTATATTGGTGAAAGGAGGGTTAGGAGGTGA 543 0.4549 MSSSNPYSPSPPIPYLTNLGFGYSIAIALGFLFLLSTLILSSYLCCRTFRNRHNRHTNQSNSDGVVLPRVIFVAEDDEQDGVVLGLEQNVINSYPRFQFGKDSGYDTTCSICLSEYKDSEMLRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLSHYIGERRVRR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02795 180 Pfam Ring finger domain 108 151 IPR001841 -
Car07g02795 180 PANTHER RING-H2 FINGER PROTEIN ATL67 10 178 IPR044289 GO:0016567|GO:0016740
Car07g02795 180 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Car07g02795 180 CDD RING-H2_PA-TM-RING 108 151 - -
Car07g02795 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 156 IPR013083 -
Car07g02795 180 SMART ring_2 109 150 IPR001841 -
Car07g02795 180 SUPERFAMILY RING/U-box 102 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02795 Car-Chr7 53575852 53577205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02795 15 170 C3H Transcription Factor Family AT5G06490 39.326 7.05e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02795 - - vra:106773185 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01596 03 61719542 61720338 Car07g02795 07 53575852 53577205 PCT