Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02789 ATGGAAGAAGATTGGGATCTACATGCCGTTGTCAGAGGCTGcaccaccgtaacaaccaccaccaccaccacTATTGCAACACCTTCATCTTCTTCTTCATCTCTTTTTGAAACCACTAGTTACCAACCTTCAACATCATCTTGCAGTTTATTCTCAATTTCAAACCCCTTTGAAGCAAAAACTTCTTCCATTGAAGAATTGCATGAACTTTGCAAACCTTTCTTCACCAAATCACACACTCCTTCTTCTAATTCATTCTCTTATTCATCTCCAAAATCATCTCACACACAACAAAAACAACACCAGCTTCACCTTGCTGCTTCTGCTACCACCCCACGATCTAAAAGAAGGAAAATTCAGCTTAAGAAGGTTTGTGAAGTGCATGCTGAGAATCTCTCCTCAGACATATGGGCATGGAGGAAATATGGTCAAAAACCCATCAAAGGCTCACCATATCCAAGAGGATATTACAGATGTAGCAGTTCAAAAGGGTGTTTAGCAAGAAAACAAGTTGAGAGAAACAAATCAGACCCAACAATGTTCATAGTAACATACACTGGTGAACATAGTCACCCTGCTCCAACTCATAGAAACTCTCTTGCTGGTTCTACACGCCAGAAGCCATTATCACCACAAACTGTCACTGTTGGAGACACTTCTCAACACCTTACAAAACCTGTTTCTGTTTCTCCAACTACATCAGAAGCTGAAGAGGAAGAAGCTGCACCTTTAAGTGCAAAGTCAGAGACCAAGGAGGAGTTGGAAGATTTGATCATGAATGATGATGAGGAAAATGAATTTGAGTTATCAGATATGGTTGTAACAGATGATTTCTTTGAAGGTTTAGATGAATTGACAGGTTTTGTTGATTCAACAACTAAAAGTTCTAGTGACTGTTTTGGTGACCCTTTTGCAGCTAGTATTGCACTTCCTGCTTGTGGTGGCCAATGA 951 0.3859 MEEDWDLHAVVRGCTTVTTTTTTTIATPSSSSSSLFETTSYQPSTSSCSLFSISNPFEAKTSSIEELHELCKPFFTKSHTPSSNSFSYSSPKSSHTQQKQHQLHLAASATTPRSKRRKIQLKKVCEVHAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNKSDPTMFIVTYTGEHSHPAPTHRNSLAGSTRQKPLSPQTVTVGDTSQHLTKPVSVSPTTSEAEEEEAAPLSAKSETKEELEDLIMNDDEENEFELSDMVVTDDFFEGLDELTGFVDSTTKSSSDCFGDPFAASIALPACGGQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02789 316 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 316 IPR044810 GO:0003700
Car07g02789 316 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 316 - -
Car07g02789 316 MobiDBLite consensus disorder prediction 79 118 - -
Car07g02789 316 SUPERFAMILY WRKY DNA-binding domain 129 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g02789 316 SMART WRKY_cls 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g02789 316 MobiDBLite consensus disorder prediction 79 109 - -
Car07g02789 316 Gene3D WRKY domain 117 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g02789 316 ProSiteProfiles WRKY domain profile. 128 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g02789 316 MobiDBLite consensus disorder prediction 191 235 - -
Car07g02789 316 MobiDBLite consensus disorder prediction 188 252 - -
Car07g02789 316 Pfam WRKY DNA -binding domain 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02789 Car-Chr7 53533429 53536030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02789 1 285 WRKY Transcription Factor Family AT4G01250 49.833 5.07e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car07g02789 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02789 K13425 - gmx:100170675 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01589 03 61660139 61661901 Car07g02789 07 53533429 53536030 PCT